Gene Swit_5199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5199 
Symbol 
ID5195699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp90202 
End bp90804 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content59% 
IMG OID640579129 
Producthypothetical protein 
Protein accessionYP_001260077 
Protein GI148550638 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.669876 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAACG AACATGAGTT GGTTGCCGAT TCAAGAGTTG TGGCGACTTG GATCGAAGGA 
TGGACCATTG CCCGCGAAAC GCCGCCTCCG GTCGAAGATC ACGGTGGTTT CAGAGTCGAT
GTGGGATGGC CGCAACAACG GACGCGCTAT GTCTTTACCG ATATCTCGCC GGCCCTGCAC
GAATTGGCCA CCACGATCGA GGAGCCGTGG GTTTTTTTGA AAGCTTGTGT CTCGGCGACA
GCAATGCGCG TCGCCTTACC AGAACACTGG GTAATACAGC CACCGGGCTT CATGATGAAA
TATCGGCGCA TCATGCCCGG CGATTCCGCG CCTCCTGACG GCTATCTGCT CGATGCGGCT
GAACCTCGCC CCATTGTAAT CGTGCGGGCG CTTACTCCGA GCGGCGCGCT GGTCGCAATC
GGACGTGTCG TTCGCGTCGG TGAGTTTGCC ATATACGATC GGATCGAAAC CAACGCCGCT
CATAGACGGC GCGGCCTCGC GCGAACCGTC ATGAAGAAAC TTGAATCCAT CGCGCGCATC
ATGGTGCGAC GCGGGAGGTG TTGGTCGCCA CTGCAGAGGG TCGCGGTCTC TATGCATCCT
TAG
 
Protein sequence
MANEHELVAD SRVVATWIEG WTIARETPPP VEDHGGFRVD VGWPQQRTRY VFTDISPALH 
ELATTIEEPW VFLKACVSAT AMRVALPEHW VIQPPGFMMK YRRIMPGDSA PPDGYLLDAA
EPRPIVIVRA LTPSGALVAI GRVVRVGEFA IYDRIETNAA HRRRGLARTV MKKLESIARI
MVRRGRCWSP LQRVAVSMHP