Gene Swit_5194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5194 
Symbol 
ID5195826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp82900 
End bp83991 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content67% 
IMG OID640579124 
Producthypothetical protein 
Protein accessionYP_001260072 
Protein GI148550633 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.911534 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACAC GAGCGAGTTC CCCCAGCCTT CCTGCAGCGC CCAGGCCAAG GCGCTTCACG 
CGCGGATCCT CCCCGATCCC GACAACGGCA AAGGCGAAGC GCCGGAGCCG CTCCAGCCTC
CTCCCGGTCT CAGGCTCGCG CCCCTCGGTT GACCTCGCGG GGCGAACGGT CGCGTTATCG
GCCGACATTC CCGCGACCTT CGACCAGCCC CTCAGCAATC ACCACAAGCT GATCGGCCGC
TGGGTCGCGG GGCGAGAGCC GAGCGCCAAG CAATACACCC GTGTGAGTGC CCGCCGCCGC
ATCGAGCAGG TTTTCAACGC TGCCGTGCTC GAGATCCTGG ACCCGATCGA AATCGTCGAC
CTGCGGATCG CGGTCCTCAC CGGCGAAGAC GCCAACCCGC CGGCGATCGC GGTCGCGTGT
GACAGCCTCG GACAGCTGGA TCTCGGCTGG ATCGAAACCG GCGAGGCGCC CACCCCCTGG
CGTGCCGCGG CCTATGCGGC GCTCGGCGAA ACCCTCGGCA CCGCGCTCCC GATCTTCGGC
TACCAGGACC TCTTCGACGA AATCTCCATG TATTACTGGG ACGGGGAGAT CGACGACGAG
GGCGCGCGCC AGAGCCTGAT CGCCTATCAC GGCCTCAGCG CCGAGGAACT CGAAGAGCAG
ACCATGCCTT CGGAGATGAA CGCGCGCCGG CCTGACTGGA TGATCGGCGC GAACGCGGCG
AAACCGGCCG CCCTTCCGAA GGGCCTGCGC GAGGCGCTCT GCCAGCTTCG CGACGCGCAC
AAGGCGCTCA AGCGGCTGCC ATCGGACCGC AACGCCTGGC ACTTCGATAC CGACATTCTC
TACGAATATG TGCCGGGGAT CGAGGAATGC TCGTCCCTGC CGCCGTTGAC GCTCGTGCCT
TTCGATGAGT TCGCGCGCGA GCTCGACGAT GTCGCCCGCC ACGGCATGGA AATGGGCTTC
ATGGACGTCT GCGGCATCTG CCCGCTGCCC GATGTCAGCC GGATCGACGA CTGGTTCGCA
AGCCTGCGCC TCGGCGTCCA GTTCCTGCTC GCCGCCCAGG ACCTCGTCCG CTTCGACCCA
CCCAATCCGT GA
 
Protein sequence
MATRASSPSL PAAPRPRRFT RGSSPIPTTA KAKRRSRSSL LPVSGSRPSV DLAGRTVALS 
ADIPATFDQP LSNHHKLIGR WVAGREPSAK QYTRVSARRR IEQVFNAAVL EILDPIEIVD
LRIAVLTGED ANPPAIAVAC DSLGQLDLGW IETGEAPTPW RAAAYAALGE TLGTALPIFG
YQDLFDEISM YYWDGEIDDE GARQSLIAYH GLSAEELEEQ TMPSEMNARR PDWMIGANAA
KPAALPKGLR EALCQLRDAH KALKRLPSDR NAWHFDTDIL YEYVPGIEEC SSLPPLTLVP
FDEFARELDD VARHGMEMGF MDVCGICPLP DVSRIDDWFA SLRLGVQFLL AAQDLVRFDP
PNP