Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_5194 |
Symbol | |
ID | 5195826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009507 |
Strand | - |
Start bp | 82900 |
End bp | 83991 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640579124 |
Product | hypothetical protein |
Protein accession | YP_001260072 |
Protein GI | 148550633 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.911534 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAACAC GAGCGAGTTC CCCCAGCCTT CCTGCAGCGC CCAGGCCAAG GCGCTTCACG CGCGGATCCT CCCCGATCCC GACAACGGCA AAGGCGAAGC GCCGGAGCCG CTCCAGCCTC CTCCCGGTCT CAGGCTCGCG CCCCTCGGTT GACCTCGCGG GGCGAACGGT CGCGTTATCG GCCGACATTC CCGCGACCTT CGACCAGCCC CTCAGCAATC ACCACAAGCT GATCGGCCGC TGGGTCGCGG GGCGAGAGCC GAGCGCCAAG CAATACACCC GTGTGAGTGC CCGCCGCCGC ATCGAGCAGG TTTTCAACGC TGCCGTGCTC GAGATCCTGG ACCCGATCGA AATCGTCGAC CTGCGGATCG CGGTCCTCAC CGGCGAAGAC GCCAACCCGC CGGCGATCGC GGTCGCGTGT GACAGCCTCG GACAGCTGGA TCTCGGCTGG ATCGAAACCG GCGAGGCGCC CACCCCCTGG CGTGCCGCGG CCTATGCGGC GCTCGGCGAA ACCCTCGGCA CCGCGCTCCC GATCTTCGGC TACCAGGACC TCTTCGACGA AATCTCCATG TATTACTGGG ACGGGGAGAT CGACGACGAG GGCGCGCGCC AGAGCCTGAT CGCCTATCAC GGCCTCAGCG CCGAGGAACT CGAAGAGCAG ACCATGCCTT CGGAGATGAA CGCGCGCCGG CCTGACTGGA TGATCGGCGC GAACGCGGCG AAACCGGCCG CCCTTCCGAA GGGCCTGCGC GAGGCGCTCT GCCAGCTTCG CGACGCGCAC AAGGCGCTCA AGCGGCTGCC ATCGGACCGC AACGCCTGGC ACTTCGATAC CGACATTCTC TACGAATATG TGCCGGGGAT CGAGGAATGC TCGTCCCTGC CGCCGTTGAC GCTCGTGCCT TTCGATGAGT TCGCGCGCGA GCTCGACGAT GTCGCCCGCC ACGGCATGGA AATGGGCTTC ATGGACGTCT GCGGCATCTG CCCGCTGCCC GATGTCAGCC GGATCGACGA CTGGTTCGCA AGCCTGCGCC TCGGCGTCCA GTTCCTGCTC GCCGCCCAGG ACCTCGTCCG CTTCGACCCA CCCAATCCGT GA
|
Protein sequence | MATRASSPSL PAAPRPRRFT RGSSPIPTTA KAKRRSRSSL LPVSGSRPSV DLAGRTVALS ADIPATFDQP LSNHHKLIGR WVAGREPSAK QYTRVSARRR IEQVFNAAVL EILDPIEIVD LRIAVLTGED ANPPAIAVAC DSLGQLDLGW IETGEAPTPW RAAAYAALGE TLGTALPIFG YQDLFDEISM YYWDGEIDDE GARQSLIAYH GLSAEELEEQ TMPSEMNARR PDWMIGANAA KPAALPKGLR EALCQLRDAH KALKRLPSDR NAWHFDTDIL YEYVPGIEEC SSLPPLTLVP FDEFARELDD VARHGMEMGF MDVCGICPLP DVSRIDDWFA SLRLGVQFLL AAQDLVRFDP PNP
|
| |