Gene Swit_5193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5193 
Symbol 
ID5195736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp82068 
End bp82892 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content69% 
IMG OID640579123 
Producthypothetical protein 
Protein accessionYP_001260071 
Protein GI148550632 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.264545 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATC ACAGCAGCCA CTTCGAAACC ACTGGCGGCG GTCTCGTCCT GACCAACGCC 
GTTCTGCTCT ATCAGGCGGG AACGCCCCGC ACGCCCAGCC CTTATGGCGC TCCAAGGCCG
GATGCGGCGG CCTTCGCCAG CATGCATGCC GTCGAGCACG ATGCGGACGG GCGTCCGACG
ATCGCCGCCG GCGTGCCCCT GTCGCGGGCA CAGCTGCGCC AATGGACAGA GGCGCTGGGC
CGGACCGCGG TTCCAGAGAT CCTGCCGGCC AATGTGCTTG TCTCCCACCC GGACGTCCTC
GCCTGGTGGG TGCCGGAGCA GGTGCGCCAA GCCTATTTTG CGCTGTCGTC GCCCCCCGAT
GGCCTTCGGG CGCTCGCACG GCGCACTACC GTCGCGGTGC CATACCCGGC CCATCTGTTC
GTCGCCACGC GCTCCGGCCT CGGCGTTTAC GCGCTTGCCG CAAGCGAGCG CCCTGCCGCC
GACACGCCGG TGCTCCATTC GCCGATCCTC AACGTCTTCA TCCAAGGCCG GCTGTGCTGG
GGCAACATCC CGAGGCCGAA AACACTGGGC GTTGCCGCCA TCTCGGAATT CGAGCGCGCG
GTGTTCGACA GCTGGTCAAC TCACCCCAAC CCCGGCCAGG AGCGGACGGT CACGGGGAAG
GGCGGCCTGG TCAGGCTCTG GGACGATCTT GCCGCGCGCG GCGCGCGTCG TTTTCCGGTG
AAGCGGCTCC GATCCTTCCA TCCTGCCGCC GGCCAGCGGC AAGTCCGTCC CGCCGCTGAT
GCGGTCACGG TCGGTATGCT CGTTGCCGCA GCGGCAGGGA GATGA
 
Protein sequence
MSDHSSHFET TGGGLVLTNA VLLYQAGTPR TPSPYGAPRP DAAAFASMHA VEHDADGRPT 
IAAGVPLSRA QLRQWTEALG RTAVPEILPA NVLVSHPDVL AWWVPEQVRQ AYFALSSPPD
GLRALARRTT VAVPYPAHLF VATRSGLGVY ALAASERPAA DTPVLHSPIL NVFIQGRLCW
GNIPRPKTLG VAAISEFERA VFDSWSTHPN PGQERTVTGK GGLVRLWDDL AARGARRFPV
KRLRSFHPAA GQRQVRPAAD AVTVGMLVAA AAGR