Gene Swit_5192 details

Gene Information

• Locus tag: Swit_5192
• ID: 5195635
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sphingomonas wittichii RW1
• Kingdom: Bacteria
• Replicon accession: NC_009507
• Strand: -
• Start bp: 81316
• End bp: 82065
• Gene Length: 750 bp
• Protein Length: 249 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 640579122
• Product: hypothetical protein
• Protein accession: YP_001260070
• Protein GI: 148550631

Plasmid Coverage information

• Num covering plasmid clones: 41
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 22
• Fosmid unclonability p-value: 0.374053
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATCGCCG AAGATCCGAC CGCGGCGGCA CTGCTCGCTG TCGTGCCCTG CTATCCGGTG 
CCATCGAGCG GTGGCTCGCC GGCACTCGAC GCGCTTCGCG GCAGCCGTGC CGGCCACGGC 
CTTGCGGTGG GCAAGGATGG CGTAATGCTC ATCCTGCGCC GGCCATGGCT TGCTCTCGAT 
GCGCCGGTGA CGCCGCCGAT CGCCGCCTAT CTTCCTTATG GCAGCATCGG GTCACCCAAG 
GCCGACCTGC GCTGCGGACT GATCCCTGGC GAGCATCTGG CTGCGATCCT CGATCACTTC 
CGGGCGGCTC TGCCCAACGA GGCTGCGGCC TTCATCCTCT GGAACGAGAC GACCAACACG 
TTCGCGGTCG ATTTTCCGGC AATCGACGAC GCCACGCCGA CACGCCTCGT CTATCGCCCC 
CCGGTCTGCG AGCCGGGCTG GCACATGGTC TGCGACATCC ACAGCCACGG GCGGGGGCCC 
GCCTATTTCA GCGCGACCGA CGATGCGGAC GACGCCCACG CTACGAAAAT TTCGCTCGTC 
ATCGGCCGGC TCCACGATCC CGCTGGCCCG GTCATGGCAG CGCGGCTCTG CGCGGGCGGC 
ATGTTCCTGG CCGTACCGCG CAGTCCATTT TCCGGAGACA ATCCATGCAG CCTGAGAGCC 
CCAAGCGCCA CTATCTTCCC GCCGCCTTCG ACAACAGCGC TGTCCGAATC CTGCTCGTGG 
GATGCGGTGG AAACGGAGCG CAAATGCTGA 

 

Protein sequence

MIAEDPTAAA LLAVVPCYPV PSSGGSPALD ALRGSRAGHG LAVGKDGVML ILRRPWLALD 
APVTPPIAAY LPYGSIGSPK ADLRCGLIPG EHLAAILDHF RAALPNEAAA FILWNETTNT 
FAVDFPAIDD ATPTRLVYRP PVCEPGWHMV CDIHSHGRGP AYFSATDDAD DAHATKISLV 
IGRLHDPAGP VMAARLCAGG MFLAVPRSPF SGDNPCSLRA PSATIFPPPS TTALSESCSW 
DAVETERKC