Gene Swit_5189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5189 
Symbol 
ID5195851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp78621 
End bp79325 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content61% 
IMG OID640579119 
Producthypothetical protein 
Protein accessionYP_001260067 
Protein GI148550628 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.251569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA CCACTTCGTC GGGCGCGCCC GCGCGCCTCT ATAGCCAGAC CCCATATGAC 
GATCGAGGCA ACTTCCATTA TCAGGGCGAT CTCTATCGTC CCAGTGATAA TCTTGCGACC
CTCGCTGGCC GCATCGAACC GCATCTGGCG CGGTGCTTTC CGAACGCGTC CTTTGCGATC
CAGACCCAGA AATTCGCGGG AGGACGCAAG ATCACCGCTG AGATCCTCGA CTGGCCCGAG
GATCTGACCG GGCGTGACGC TCAGGAGGCC GCGCAGGTCG CGATCCGCGA CCAGATGGAG
CGGTTCGGAA CTACCCGCAC CAACCCTCTA CAGGACTTCT GGTCCTGCTC CTTCTACTGC
GAAGCGCGCA TTGGACAGGT TTATTGGTCG GCGCTCGCGA AACGCAACGG ACTGAAGAAT
CCGGTCGACG CGATCGTATC GCTGGCCGCC TTCAAGAAGC GCGTAAAAGC GGGCGACGCC
CTCAAACTGG TCGATGCGCC GGCAGGGCAT CGCGCAATTG GGACCACGCG GACGATCACC
AAGGTGCGCT CGGGCGATCT GATCCTCGAA GGCAAATCCT ATCTCGGTTT CCCGCGGGCG
TCGGCTTTCG CGTGCGATGG CAAGTTCGTT CGCATCTCGA TCGGATCGGA ATATGAGCCG
GACGCCCATC TGCTGTACGA GTGGATAGTG CAAAAGGCCG CGTGA
 
Protein sequence
MTDTTSSGAP ARLYSQTPYD DRGNFHYQGD LYRPSDNLAT LAGRIEPHLA RCFPNASFAI 
QTQKFAGGRK ITAEILDWPE DLTGRDAQEA AQVAIRDQME RFGTTRTNPL QDFWSCSFYC
EARIGQVYWS ALAKRNGLKN PVDAIVSLAA FKKRVKAGDA LKLVDAPAGH RAIGTTRTIT
KVRSGDLILE GKSYLGFPRA SAFACDGKFV RISIGSEYEP DAHLLYEWIV QKAA