Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_5189 |
Symbol | |
ID | 5195851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009507 |
Strand | - |
Start bp | 78621 |
End bp | 79325 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640579119 |
Product | hypothetical protein |
Protein accession | YP_001260067 |
Protein GI | 148550628 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.251569 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACA CCACTTCGTC GGGCGCGCCC GCGCGCCTCT ATAGCCAGAC CCCATATGAC GATCGAGGCA ACTTCCATTA TCAGGGCGAT CTCTATCGTC CCAGTGATAA TCTTGCGACC CTCGCTGGCC GCATCGAACC GCATCTGGCG CGGTGCTTTC CGAACGCGTC CTTTGCGATC CAGACCCAGA AATTCGCGGG AGGACGCAAG ATCACCGCTG AGATCCTCGA CTGGCCCGAG GATCTGACCG GGCGTGACGC TCAGGAGGCC GCGCAGGTCG CGATCCGCGA CCAGATGGAG CGGTTCGGAA CTACCCGCAC CAACCCTCTA CAGGACTTCT GGTCCTGCTC CTTCTACTGC GAAGCGCGCA TTGGACAGGT TTATTGGTCG GCGCTCGCGA AACGCAACGG ACTGAAGAAT CCGGTCGACG CGATCGTATC GCTGGCCGCC TTCAAGAAGC GCGTAAAAGC GGGCGACGCC CTCAAACTGG TCGATGCGCC GGCAGGGCAT CGCGCAATTG GGACCACGCG GACGATCACC AAGGTGCGCT CGGGCGATCT GATCCTCGAA GGCAAATCCT ATCTCGGTTT CCCGCGGGCG TCGGCTTTCG CGTGCGATGG CAAGTTCGTT CGCATCTCGA TCGGATCGGA ATATGAGCCG GACGCCCATC TGCTGTACGA GTGGATAGTG CAAAAGGCCG CGTGA
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Protein sequence | MTDTTSSGAP ARLYSQTPYD DRGNFHYQGD LYRPSDNLAT LAGRIEPHLA RCFPNASFAI QTQKFAGGRK ITAEILDWPE DLTGRDAQEA AQVAIRDQME RFGTTRTNPL QDFWSCSFYC EARIGQVYWS ALAKRNGLKN PVDAIVSLAA FKKRVKAGDA LKLVDAPAGH RAIGTTRTIT KVRSGDLILE GKSYLGFPRA SAFACDGKFV RISIGSEYEP DAHLLYEWIV QKAA
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