| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5185 |
|---|
| Symbol | |
|---|
| ID | 5195754 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009507 |
|---|
| Strand | - |
|---|
| Start bp | 74678 |
|---|
| End bp | 75214 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640579115 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001260063 |
|---|
| Protein GI | 148550624 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.110518 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTCACCG AATTGGAGAA GGCCATGTCC GACATCATCG ATCTGGGCGG CGCGCCAGCG
AACGAGGATT GCGCCCAGCT CGGGCACACA TCCGACTTCG AGCGATTGAA CCGCCTTGAG
GTCGCCACCT ACCGCGCGGC AATCATCGCC CGTTTCGGTC CGCCGCCTGA CGGCTGCGCG
CTGCTCACAT TGACCAACCG GCACGATTTC GGCGTCTATT ACACGCTCGG TCTCAAGGTC
GATGCAAGCG CCACGCGGCG CGATTCCACC GTCGCCACCT ATGCGGAGAC CGTCGAGAAC
GGCCTTGGCA GCTGGATCGA GGCCGGCTTC GCCGCGCCGG TCTGCTATGA GGACGGGGAG
GCCCCCAAGG TCGAGCGAAG CTCGATCGAC GACATCGTCA TGGGGGCGCT CCTCGCCACG
CGGCCCGGCC CCGACGGACA CTTCCCGGTC GCCGACTTCG CGATACTCCA CCGCAATCTG
GCTGCAGGCT ATCCCCGCAG CGCCGAGGCC GCACAGCGCC TCCCCGAGGA GATTTGA
|
|---|
| Protein sequence | MLTELEKAMS DIIDLGGAPA NEDCAQLGHT SDFERLNRLE VATYRAAIIA RFGPPPDGCA
LLTLTNRHDF GVYYTLGLKV DASATRRDST VATYAETVEN GLGSWIEAGF AAPVCYEDGE
APKVERSSID DIVMGALLAT RPGPDGHFPV ADFAILHRNL AAGYPRSAEA AQRLPEEI
|
|---|
| |