Gene Swit_5183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5183 
Symbol 
ID5195648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp73809 
End bp74201 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content61% 
IMG OID640579113 
Producthypothetical protein 
Protein accessionYP_001260061 
Protein GI148550622 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.30118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCACT GCTATTATCA CGCGCTCAGC TCCGTGAAGC GCTGGGGCGG CGAGGCCGAG 
GACTATCTGC CCCTCCACCA ATGGTTCGAC GAGTCGAAGA AGATCGTCGC GGACCCCCGC
CACCGTTCCT TGCGCCACCA TGCAGAGGGC ATATTCATGC TCGAGACGGT CTTCGGCGTG
ACGATCCGAA ACGCTGATGG ACGGGATATC CCGGTGCGGT TGATCGGGGA ACAGCACGTC
CAAGAGGATC TTGGCCGTAT TCCCTCCTTC GCTGACTGGG CGCGGCTCAT CCAGCCGATG
CCGTGGATTC TTCGGGGCAA CCCGGCCGGG TCACCGGGAT TGGATCCAGA TGTTGAAAAC
ATGTGCCACG TTGCTCCAGC GACGCAATTG TAG
 
Protein sequence
MSHCYYHALS SVKRWGGEAE DYLPLHQWFD ESKKIVADPR HRSLRHHAEG IFMLETVFGV 
TIRNADGRDI PVRLIGEQHV QEDLGRIPSF ADWARLIQPM PWILRGNPAG SPGLDPDVEN
MCHVAPATQL