Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_5179 |
Symbol | |
ID | 5195672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009507 |
Strand | - |
Start bp | 71473 |
End bp | 72168 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640579109 |
Product | hypothetical protein |
Protein accession | YP_001260057 |
Protein GI | 148550618 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.295611 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCAACC ATTTTACCAA GGCGAGCTTC ACCTTCGCTG TCACCGATGC CGAGGCCGAA ATCTTCCGGC ATGTCGGCGA GGCTGCCGAG ATCGTTGGCG ATTCCCGCCT CGCACCCGAT CAGCGCGCTG CAGCCTATGC CGACCTTGGC GCGGGCTTCG CCGCCTGTTT TCCCCCGATC GACTCCGATC CCTTCGGCGG CTTCCTCGCG ATCTTGAGCG ATCCCGATTA TCCACGGCTC GGCTTCTCCG TCCAGGTCGA TCCGTCGGAT GGGACAGGGC GGTGCAAGGT CTGGCTCCAT GGCGATCAGT TCGACGTAGA AACCGCCGCG CAACTGATCC AGAAGGTCGC GAAATCCGCG CTGCCGGCCG GCTTCGAATA TTGCCTCGAT TGCGACCGCC TGCGCCCTGG CGAATTCGGC GGCGGCTATG TCGTGATCCG CGAGGATCGC TTCGAATTCG CCTCATCGGC CCAGCTCCTC GAGCGGGCGC TTTCGCGCGA GCACCGTGAA GGCGCCGACG GCTACGTCCT CACCACGCGA GATGCTGAAG AGGGTCTGCT GTTCTGGAAC AATGACACGG GCTTTGGCGA GCTAAGCACC GCAACCGTGT TCTCCGAAGC CGAGGCCGGC CGTTTCGACG TTCCCATCGC CCATGATCAG CCGGAATGGC TGGCCATGCC GGCGCCGATC TCCTGA
|
Protein sequence | MANHFTKASF TFAVTDAEAE IFRHVGEAAE IVGDSRLAPD QRAAAYADLG AGFAACFPPI DSDPFGGFLA ILSDPDYPRL GFSVQVDPSD GTGRCKVWLH GDQFDVETAA QLIQKVAKSA LPAGFEYCLD CDRLRPGEFG GGYVVIREDR FEFASSAQLL ERALSREHRE GADGYVLTTR DAEEGLLFWN NDTGFGELST ATVFSEAEAG RFDVPIAHDQ PEWLAMPAPI S
|
| |