Gene Swit_5179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5179 
Symbol 
ID5195672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp71473 
End bp72168 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content64% 
IMG OID640579109 
Producthypothetical protein 
Protein accessionYP_001260057 
Protein GI148550618 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.295611 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAACC ATTTTACCAA GGCGAGCTTC ACCTTCGCTG TCACCGATGC CGAGGCCGAA 
ATCTTCCGGC ATGTCGGCGA GGCTGCCGAG ATCGTTGGCG ATTCCCGCCT CGCACCCGAT
CAGCGCGCTG CAGCCTATGC CGACCTTGGC GCGGGCTTCG CCGCCTGTTT TCCCCCGATC
GACTCCGATC CCTTCGGCGG CTTCCTCGCG ATCTTGAGCG ATCCCGATTA TCCACGGCTC
GGCTTCTCCG TCCAGGTCGA TCCGTCGGAT GGGACAGGGC GGTGCAAGGT CTGGCTCCAT
GGCGATCAGT TCGACGTAGA AACCGCCGCG CAACTGATCC AGAAGGTCGC GAAATCCGCG
CTGCCGGCCG GCTTCGAATA TTGCCTCGAT TGCGACCGCC TGCGCCCTGG CGAATTCGGC
GGCGGCTATG TCGTGATCCG CGAGGATCGC TTCGAATTCG CCTCATCGGC CCAGCTCCTC
GAGCGGGCGC TTTCGCGCGA GCACCGTGAA GGCGCCGACG GCTACGTCCT CACCACGCGA
GATGCTGAAG AGGGTCTGCT GTTCTGGAAC AATGACACGG GCTTTGGCGA GCTAAGCACC
GCAACCGTGT TCTCCGAAGC CGAGGCCGGC CGTTTCGACG TTCCCATCGC CCATGATCAG
CCGGAATGGC TGGCCATGCC GGCGCCGATC TCCTGA
 
Protein sequence
MANHFTKASF TFAVTDAEAE IFRHVGEAAE IVGDSRLAPD QRAAAYADLG AGFAACFPPI 
DSDPFGGFLA ILSDPDYPRL GFSVQVDPSD GTGRCKVWLH GDQFDVETAA QLIQKVAKSA
LPAGFEYCLD CDRLRPGEFG GGYVVIREDR FEFASSAQLL ERALSREHRE GADGYVLTTR
DAEEGLLFWN NDTGFGELST ATVFSEAEAG RFDVPIAHDQ PEWLAMPAPI S