Gene Swit_5167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5167 
Symbol 
ID5195832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp62443 
End bp63045 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content68% 
IMG OID640579097 
Producthypothetical protein 
Protein accessionYP_001260045 
Protein GI148550606 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.0883436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAC CTGCCCCTTC GAACACCGCC GCCGCCCATT GCTACGGCAT CGTCCTTCAC 
CATCGGCTCG CCTGGTGGCT GGTCGAATTT CCCGAACTCG ACGCGGCGCC GACCGCCGCG
CGCAAGCTTT CGGGCAAGCT CACGCCGGGC ATGGCCGACT GGCTCCGCTC CGAGACCGGC
GATGCCGGTC TCGCGGCCGA CGTCGCTGCG CTCCATCCCC AGAGCCGGTG CTGGTCCGGC
GAATTCTCCT ACCTCCCCGC GGCCGGCGCC GCCGACCAGA TCGACATCGA TGCCCATCCC
TGGGGCAGCG AAGCCGGTGA ACTCGAGACC CGGCTCGCGC GCACGATGAT CGATGCGACA
CTGCATCCGG TTCCCGCGGG CTTCATCTCA GTCTTCACGG GCCTACCGCC GGAGAACCAG
CCCGTGCTCG CGATCAGGTT GAGCGGCTAC ACCTGTTCGA CCTTCGAACT GCTCACCGCC
CGGCATATGC CGACCTATCG GCCGCGGTCG CCCTGGCGCG ACATCTCGGC CGATGCGGTC
AGCGATAGCG GCAGCGACAT CATCGGCTGG CAGCCGGCGG CCGACTGGAT CAGGCCTATC
TGA
 
Protein sequence
MIKPAPSNTA AAHCYGIVLH HRLAWWLVEF PELDAAPTAA RKLSGKLTPG MADWLRSETG 
DAGLAADVAA LHPQSRCWSG EFSYLPAAGA ADQIDIDAHP WGSEAGELET RLARTMIDAT
LHPVPAGFIS VFTGLPPENQ PVLAIRLSGY TCSTFELLTA RHMPTYRPRS PWRDISADAV
SDSGSDIIGW QPAADWIRPI