Gene Swit_5149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5149 
Symbol 
ID5195618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp41146 
End bp41880 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content62% 
IMG OID640579079 
Producthypothetical protein 
Protein accessionYP_001260027 
Protein GI148550588 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.720779 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTCG GCTACGCGCT GCTTGGCGCT CTGGTTCTTC TGCTTCCCGG GTTTGCGGGT 
TATTTCGGTC TTCGTATTGG CGAGGCGAGT GATTTTGTGT CGCCGCGGCC CGACCGGCCC
AATTCCAATC TCACCATTTT CCTGATTGTG CTGCTGGCGC TCGCTGCGCA CACCGCCGGG
GCGGGAATTT TTGCCTTCAA CGAAGCGATA GCGGCGTGGA AGCCGCTGAT CTCGCTTCCC
TATGATCCCA ATCCCTACAA GGCACTTCTG TCCGGCCAGG TCCCATCGGG GCTTTCCGCG
CTCGCAATCG AACTGGAACT GCTGTTCTGC CTGGCGCTTT CCTTTGGGAC CGGCTGGGTC
TGCGAGAGAA TGGCGCGCGC CAAGCCGATT ACGACCCGAA CCGCGCCCTT GCGCTTCGGA
TGGCTCCTGC CGATCGTCGA GAAGGTCGAG GCCGGTGGCC ATGTCGCGGT CGGTTATGTG
CGCACGACGA GCGGCCACAA CGGTGCCTGG GTCGCCTATG AAGGCAGCAT CCGGCGCCTG
ACGCTCGACG ATGACGACGG AATCCGCATG GTGGTGCTCG AGCAGTGCGA TCGCTTCATT
GTCCGGATGA CGGACGACAA GATCGAGCGG GTCGACATGG ACAGCGCGCC GATCGCCATG
ATGCATCTTG CCGCCGACCA GATCGCCGAT TTCGCAATCG AACTGTTCGA GGTTCCCGAG
ATCGGCGCTG ACTGA
 
Protein sequence
MTFGYALLGA LVLLLPGFAG YFGLRIGEAS DFVSPRPDRP NSNLTIFLIV LLALAAHTAG 
AGIFAFNEAI AAWKPLISLP YDPNPYKALL SGQVPSGLSA LAIELELLFC LALSFGTGWV
CERMARAKPI TTRTAPLRFG WLLPIVEKVE AGGHVAVGYV RTTSGHNGAW VAYEGSIRRL
TLDDDDGIRM VVLEQCDRFI VRMTDDKIER VDMDSAPIAM MHLAADQIAD FAIELFEVPE
IGAD