Gene Swit_5147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5147 
Symbol 
ID5195849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp39901 
End bp40575 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content57% 
IMG OID640579077 
Producthypothetical protein 
Protein accessionYP_001260025 
Protein GI148550586 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.688934 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGAGC GCGGCCCAAG CCAGTGGCCG GTCCTGTTCG ATCTTGCGAT GGAAATCTTC 
GCCCAATTCG AGGAGAACGT CGGCTTCGTG CCCTCGTGGA GCTTCGGCGG CGGGACGGCG
CTCATGCTCC AGATCGATCA TCGTGAAAGC CACGACATCG ATATCTTCCT TGATGATCCG
CAAATCCTGC CTTTTCTCAA TCCAGAGATC CAGGATTTCG CAATGACCCG TCGGCCGGAC
GAATATAAGA GCGACGGGAC GCAGGCGCTC AAACTCGCCT TTGACGAACT GGGTGAGATC
GACTTCATTT GTTCGTCCGC CATCCTCGAT GTTTCCAGTG AGCGCCACGA TGTGAGGGGG
CGGACGGTCG ACCTTGAAAC TCCGGCCGAG ATTGCAGCGA AGAAAGTTTA CTTCCGGGGC
TGGAACTTGC AGCCACGCGA CATGTTCGAT CTTGCTGCCA TCGCCGAGCA CCATGGTGAC
GACTATGTCG TGTCAGCATT GCGTGAATGC GGCCATGAGC GATGCCGCAA GGCGCTGGAA
GTCGTCGAGA AGGTCAACCC GAAGGCTGTC GAGACGGTGA TTGGCCAGCT GCTGTACAGG
GAAAAGAACA GCCATCTGGT CGCAGAGGCG CAGGCGATTA CGCACCGAAT TTTAGGGGCT
TCACTTTCCG ATTAA
 
Protein sequence
MVERGPSQWP VLFDLAMEIF AQFEENVGFV PSWSFGGGTA LMLQIDHRES HDIDIFLDDP 
QILPFLNPEI QDFAMTRRPD EYKSDGTQAL KLAFDELGEI DFICSSAILD VSSERHDVRG
RTVDLETPAE IAAKKVYFRG WNLQPRDMFD LAAIAEHHGD DYVVSALREC GHERCRKALE
VVEKVNPKAV ETVIGQLLYR EKNSHLVAEA QAITHRILGA SLSD