Gene Swit_5138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5138 
Symbol 
ID5195682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp31056 
End bp31823 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content63% 
IMG OID640579068 
ProductIstB ATP binding domain-containing protein 
Protein accessionYP_001260016 
Protein GI148550577 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.16967 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.673975 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATC AGGCCCCGGA GATCCTTCTC GCTCACCATC TCAAGGCGCT CAAGCTGCCT 
ACGTGCCTGC GTGAGCATCA CAAGCTCGCG CGGCAATGTG CCGCTGAAGG CGTCGATCAT
ATCCGCTTCC TCGCCCGCCT CGTCGAGATG GAAATGATCG ACAGGGAGCG TCGCATGGTC
GAGCGGCGCA TCAAGGCCGC GCGCTTCCCC GCCGTCAAAA GCCTCGACAG CTTCGACTTC
GCCGCCATCC CCAGGCTCAA CAAGATGCAG GTGCTCGAGA TGGCGCGCTG CGAGTGGATC
GAGCGGCGTG AGAACGCCAT CGCTCTGGGG CCATCAGGCA CCGGAAAGAC GCACGTAGCG
TTGGGGCTCG GACTGGCAGC ATGCCAGAAA GGACTGTCGG TGGGCTTCAC CACCGCGGCA
GCGCTGGTCA GCGAAATGAT GGAGGCCCGC GACGAGCGCC GTCTTCTGCG CTTCCAGAAG
CAGATGGCCG GATACAAGCT GCTCATCATC GACGAACTGG GCTTTGTGCC GCTCTCCAAG
ACCGGCGCCG AACTGTTGTT CGAGCTGATC TCCCAGCGTT ACGAACGCGG CTCCACCTTC
ATCACCAGCA ACCTGCCCTT CGACGAATGG ACCGAAACCT TCGGATCTGA GCGTCTCACA
GGCGCGCTCC TCGATCGCCT GACCCATCAC GTCAGCATCC TCGAGATGAA CGGCGAAAGC
TATCGCCTCG CGCACAGCCG GGCCCGCAAG GCCAAAACCA GACCCTGA
 
Protein sequence
MSDQAPEILL AHHLKALKLP TCLREHHKLA RQCAAEGVDH IRFLARLVEM EMIDRERRMV 
ERRIKAARFP AVKSLDSFDF AAIPRLNKMQ VLEMARCEWI ERRENAIALG PSGTGKTHVA
LGLGLAACQK GLSVGFTTAA ALVSEMMEAR DERRLLRFQK QMAGYKLLII DELGFVPLSK
TGAELLFELI SQRYERGSTF ITSNLPFDEW TETFGSERLT GALLDRLTHH VSILEMNGES
YRLAHSRARK AKTRP