| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5137 |
|---|
| Symbol | |
|---|
| ID | 5195786 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009507 |
|---|
| Strand | - |
|---|
| Start bp | 29836 |
|---|
| End bp | 30684 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640579067 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001260015 |
|---|
| Protein GI | 148550576 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4313] Protein involved in meta-pathway of phenol degradation |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.510015 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCGTTGTG TACGCCGATG GCCAGCACGG CGGCATGGGC GACCGACGTT GATGCCGGCG
ACTATGTCGC ACTGCCGCCG GGATCCAATC TGGCCATTGT CTATGCGCAA TTTGCCGAGC
GCGACGCCAT CTATGCCAAG GGCGACAAGC AGCCGGGTGA TCCCGGATTG GACTCGACCG
TATTCATTCT GCGCGGCGTT CACTATGGAC ATTGCCGGCC TGACGGTCGA CCCGCAGTTT
CTGCTTCCGC TCGGTCAGCT GGAAGGGAAG GGCGATACGC ACGCTTTGGG TAAAAGCGGC
GGCGCGGCCG GCGATCTTAT CCTCGCAGCC ACCGTTTGGC TGGTGAACAA GCCCAAGAGC
AATACCTATT TCGGTATCAC GCCATTCGTC TATGTGCCGA CAGGATCATA TGATCGCACC
CGCCCCCTGA ACCTGGGCGA GAACCGTTGG AAGTTCGTGC TCCAGGGCGG CTTCGTTAAG
GGGGTCACGC CCAAGATCTC GATCGACCTC GTCGGCGACG TGACCTTCTA TGGCAAGAAT
AACGACTTCG GCTCGTCTTC CGCGCGTCTG ACGCAATCCG CAAGCGGGCA GTTCCAGGCT
TTCGCCCGTT ATCAGCTCAA GCCGAACCTC GATTTCCGCG TCGGCGGCTC GTTCGTCACG
GGTGGCGAGA CGAGGATCGA TGGCATCAGG CAGCAGGATC AAGCGAGCAA TTGGAAGGGC
AATGTCGGAA TGGCCTGGTT TCCGGCGAAG ACCGTGCAAT TGCTCGCCAC CTACGGCCGC
GACATTTCGG TGAGGAGCGG ATTTCGGGAA TCGAACCGCC TCAATTTGCG TCTTCTGAAG
GTCTTCTAA
|
|---|
| Protein sequence | MRCVRRWPAR RHGRPTLMPA TMSHCRRDPI WPLSMRNLPS ATPSMPRATS SRVIPDWTRP
YSFCAAFTMD IAGLTVDPQF LLPLGQLEGK GDTHALGKSG GAAGDLILAA TVWLVNKPKS
NTYFGITPFV YVPTGSYDRT RPLNLGENRW KFVLQGGFVK GVTPKISIDL VGDVTFYGKN
NDFGSSSARL TQSASGQFQA FARYQLKPNL DFRVGGSFVT GGETRIDGIR QQDQASNWKG
NVGMAWFPAK TVQLLATYGR DISVRSGFRE SNRLNLRLLK VF
|
|---|
| |