| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5127 |
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| Symbol | |
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| ID | 5195788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009507 |
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| Strand | + |
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| Start bp | 12109 |
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| End bp | 13674 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640579057 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_001260005 |
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| Protein GI | 148550566 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.166056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATTC CATCCCGCCG CACTTTCGCG ATCATTTCCC ACCCTGACGC CGGCAAGACC
ACGCTTACCG AAAAACTGCT GCTGGAGGGC GGAGCGATCC ACCTTGCCGG CGAGGTCAAG
GCGCGTGGCG CCAACCGCCG CGCCCGTTCG GACTGGATGA AGATCGAGCA GCAGCGCGGC
ATTTCGGTCA CCAGTTCGGT GATGACGTTC GAGCGGGACG GCGTCACCTT CAACCTGCTC
GACACGCCGG GGCACGAGGA TTTCAGCGAG GATACCTATC GCACGCTGAC CGCCGTCGAC
AGCGCCGTGA TGGTGATCGA CGCGGCCAAG GGCATCGAGC CGCAGACACG CAAGCTGTTC
GAGGTATGCC GCCTGCGCAA CGTGCCGATC ATCACCTTCG TCAACAAGGT GGACCGGGAG
GGGCGCGACC CCTTCGCACT GCTGGACGAA GTGGCCGATG CGCTGGCGCT CGACGTATGC
CCGATGAGCT GGCCGGTCGG CATGGGCGGC ACGTTCGAAG GCATCTACGA CTTTGCGAAG
AACCGGCTGC GGCAGCCCAC GGGAGCAAGC AAGGAGTTCG AGGGCAAGGA AACGCATGTC
TCCGGCCTTG CCGATCCCGC GCTGGCCGAC GTGTTGAGCG AGGATGGCCT GGCGCTGCTG
CGCGAGGAGG CGGAACTGGC CCAGGGTGGC TACGCCAGTT TCGATCTTGC CGCCTATCGC
CATGGCGACC TGACCCCGGT CTATTTCGGA TCGGCGCTGA AGCTGTTCGG CGTGAACGAA
CTGATCGACG CGCTCGCCGC CTATGCGCCG CCGCCGCGCG CGCAACCCGC CGAACCGGCA
GCCATCGAAC CGGAACAGGG CGAGGTTACC GGCTTCATCT TCAAGGTGCA GGCGAACATG
GACCCGCAGC ACCGGGACCG TATCGCATTC ATGCGGCTAT GTTCCGGCAA ATTCCGGCGC
GGCATGAAGC TGACGCCGTC GGGATCGGGA AAGCCGATCG CCGTGCATTC GCCCATCCTG
TTCTTCGCGC AGGACCGCGA GATCGCCGAT GAGGCATTTC CCGGCGACAT CATCGGCATT
CCCAATCACG GCACGCTGCG CGTGGGCGAT ACGCTGTCGG AAAAGAACGA TGTGCGCTTC
ACCGGCCTGC CCAATTTCGC GCCGGAAATC CTGCGCCGTG TCGTGTTGAA GGACCCGACC
AAGACCAAGC AGCTGCGCAA GGCGCTGGAC GATCTGTCGG AAGAAGGCGT GATCCAGGTT
TTCTACCCGG AAATCGGCAG CCAGTGGGTC GTCGGCGTGG TCGGCCAGCT GCAGCTGGAC
GTGCTGATTT CCCGGCTGGA GGCGGAATAT AAGGTCGGCG CCATGCTGGA ACCTGCGCCG
TTCGAGACCG CCCGCTGGAT CGGCGGCCCG GATGCCGCGA TCAAGGGACT GGTGGAGTTC
AACCGGTCCA ACCTGGCGCG CGACCGCGAC GGCAATCTGG TGTTCATGGC GAAAAGCGCG
TGGGACGTGA ACTATCAGCA GGAACGCAAT CCCGACGTGA CGTTCAGCGC CACCAAGGAA
CGTTAG
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| Protein sequence | MTIPSRRTFA IISHPDAGKT TLTEKLLLEG GAIHLAGEVK ARGANRRARS DWMKIEQQRG
ISVTSSVMTF ERDGVTFNLL DTPGHEDFSE DTYRTLTAVD SAVMVIDAAK GIEPQTRKLF
EVCRLRNVPI ITFVNKVDRE GRDPFALLDE VADALALDVC PMSWPVGMGG TFEGIYDFAK
NRLRQPTGAS KEFEGKETHV SGLADPALAD VLSEDGLALL REEAELAQGG YASFDLAAYR
HGDLTPVYFG SALKLFGVNE LIDALAAYAP PPRAQPAEPA AIEPEQGEVT GFIFKVQANM
DPQHRDRIAF MRLCSGKFRR GMKLTPSGSG KPIAVHSPIL FFAQDREIAD EAFPGDIIGI
PNHGTLRVGD TLSEKNDVRF TGLPNFAPEI LRRVVLKDPT KTKQLRKALD DLSEEGVIQV
FYPEIGSQWV VGVVGQLQLD VLISRLEAEY KVGAMLEPAP FETARWIGGP DAAIKGLVEF
NRSNLARDRD GNLVFMAKSA WDVNYQQERN PDVTFSATKE R
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