Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_5123 |
Symbol | |
ID | 5195621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009507 |
Strand | - |
Start bp | 7245 |
End bp | 7514 |
Gene Length | 270 bp |
Protein Length | 89 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640579053 |
Product | transposase |
Protein accession | YP_001260001 |
Protein GI | 148550562 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4644] Transposase and inactivated derivatives, TnpA family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTCTTCG GCAAGGGCGG CGAGATCGCC ACCAACCGCA TCCATGAGCA GGAAATCTCC GTTCTGGCGC TACACCTCCT GCAAGCGTCG CTGGTGTATG TGAACACCCG CATGCTTCAG ACCGTACTGG TTGAGCCGAA GTGGGCGGGG CGGATGACGC CGGAAGATTA TCGTGGTCTC ACGCCGTTGA TCTACAGTCA TGTGAACCCT TATGGCCGCT TCGACCTCGA CCTGAACGAC CGGATTGATT TTGGACGGCT TGCAGCGTGA
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Protein sequence | MFFGKGGEIA TNRIHEQEIS VLALHLLQAS LVYVNTRMLQ TVLVEPKWAG RMTPEDYRGL TPLIYSHVNP YGRFDLDLND RIDFGRLAA
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