| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BOV_2079 |
|---|
| Symbol | truB |
|---|
| ID | 5202335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brucella ovis ATCC 25840 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009505 |
|---|
| Strand | + |
|---|
| Start bp | 2093456 |
|---|
| End bp | 2094430 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640579024 |
|---|
| Product | tRNA pseudouridine synthase B |
|---|
| Protein accession | YP_001259961 |
|---|
| Protein GI | 148560539 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0130] Pseudouridine synthase |
|---|
| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0054544 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGAC GGGGCAAGAA AAAAGGTCGC CCGATATCCG GCTGGGTCAT TTTTGACAAG
CCGAAGGGAA TGGGATCGAC CGAGGCGGTC TCGAAGATCA AGTGGCTTTT CAGTGCTGAA
AAGGCTGGCC ATGCGGGCAC GCTCGATCCG CTTGCTTCGG GCATGTTGCC CATCGCGCTT
GGCGAAGCCA CGAAGACGGT GCCTTATGTC ATGGACGGAA CCAAGGTCTA TCGTTTTACG
GTGACATGGG GCGAGGAGCG TTCCACGGAC GATCTGGAAG GCCAGCCCAC CAAAACTTCC
GACAAGCGTC CGTCGCGTGA GGAAGTGGAA GCACTCCTGC CGGATTATAC CGGCGTGATC
TCGCAGGTTC CGCCGCAGTT TTCCGCAATC AAGATCGATG GCGAGCGCGC TTATGATCTG
GCCCGCGAGG GTGAAACCGT GGAAATTCCC GCCCGTGAGG TCGAGATCGA CCGCCTTGAG
ATCGTAGGCT TTCCCGATGC CGACCGTACC GAATTTGAGG TGGAATGCTC CAAGGGTACC
TATGTGCGCT CGCTTGCGCG CGACATGGGG CGCGATCTCG GCTGCTATGG TCATATTTCC
GATCTGCGCC GTGTGGAAGT TGCGCCCTTC ACCGATGAAG ATATGGTGAC GCTCGCAAAG
CTTGAGGCTG TCTGGCCGCC GCTTCCGCCG AAGGATGAGG ACGGCAATGT GATCGAGCCT
GCACCGCGGC GCGATTTCTC CGCGCTTGAT GCGCTGGTGA TCGATACGGG TGCGGCACTT
GATTGTCTGC CGCAAGTGCC GCTCTCCGAC GATCAGGCCC AGCGGGTGCG CCTTGGCAAT
CCGGTCATCC TGCGCGGGCG CGATGCGCCG CTGGAAGCCG ACGAGGCCTG CGTTACCACG
CGCGGCAAGC TTCTCGCCAT CGGCTATATC GAGCACGGGC AGTTCAAGCC GAAACGGGTT
TTCACCGCCG GCTGA
|
|---|
| Protein sequence | MARRGKKKGR PISGWVIFDK PKGMGSTEAV SKIKWLFSAE KAGHAGTLDP LASGMLPIAL
GEATKTVPYV MDGTKVYRFT VTWGEERSTD DLEGQPTKTS DKRPSREEVE ALLPDYTGVI
SQVPPQFSAI KIDGERAYDL AREGETVEIP AREVEIDRLE IVGFPDADRT EFEVECSKGT
YVRSLARDMG RDLGCYGHIS DLRRVEVAPF TDEDMVTLAK LEAVWPPLPP KDEDGNVIEP
APRRDFSALD ALVIDTGAAL DCLPQVPLSD DQAQRVRLGN PVILRGRDAP LEADEACVTT
RGKLLAIGYI EHGQFKPKRV FTAG
|
|---|
| |