| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BOV_1176 |
|---|
| Symbol | secY |
|---|
| ID | 5202084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brucella ovis ATCC 25840 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009505 |
|---|
| Strand | - |
|---|
| Start bp | 1195484 |
|---|
| End bp | 1196824 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640578168 |
|---|
| Product | preprotein translocase subunit SecY |
|---|
| Protein accession | YP_001259133 |
|---|
| Protein GI | 148559716 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0201] Preprotein translocase subunit SecY |
|---|
| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0379017 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCGG CTGCTGAACA GCTAGTTTCC AATCTCAATT TTTCGGCTTT CTCGAAGGCA
GAAGAACTCA AGAAGCGCAT CTGGTTCACG CTGGGTGCTT TGCTCGTATA CCGGTTCGGC
ACCTATATTC CGCTTCCCGG CATCAATCCT GACGCGCTTG CGCAGGCTTT CCAGCAGCAT
AGCCAGGGTG TGCTCGGACT TTTCAATATG TTTGCCGGTG GCGCCGTCGG TCGTATGGCC
ATCTTCGCGC TCGGCATCAT GCCCTATATT TCCGCCTCCA TTATCGTGCA GCTCATGACG
TCCGTTGTGC CGTCGCTTGA AGCGCTGAAG AAGGAAGGCG AGGCGGGCCG CAAGATCATC
AATCAGTATA CGCGTTATGG CACGGTGCTT CTGGCGCTTG TGCAGGCTTA TGCGATTTCG
GTTGGCTTGC AGTCCGGCAA CGGCATTGTC ACCAATCCCG GGCCTTTCTT CATCGTTTCG
TCGGTGATTA CGCTTGTCGG CGGCACGATG TTCCTGATGT GGCTCGGTGA ACAGATCACG
GCGCGCGGTA TCGGCAACGG TATTTCGCTG ATTATCTTCT CCGGTATTGT CGCCAACTTG
CCGCACGCCA TTTCCGGCAC GCTGGAACTG GGGCGTACCG GTGCACTCTC AACCGGCCTT
ATTCTGGGTG TTATCGTTCT TGCGGTTGCC CTGGTTGCGG TTATCGTGTT CGTTGAACGC
GCGCAGCGCC GCCTTCTGAT CCAGTATCCG AAGCGTCAGG TCGGCAATCG TATGTTCCAG
GGCGATACGT CGCACCTGCC GCTCAAGTTC AACACCGCCG GTGTCATTCC GCCGATCTTT
GCTTCGTCGC TGCTGCTTTT GCCGGCGACG GTTGCAGGCT TTGCCAATAC GACGGAAATG
CCAGCCTGGG CGACCACCGT TCTCAATGCG CTCGGCCATG GACAGCCGCT TTATATGCTG
TTCTACGCTG CATTGATGGC ATTTTTCTGC TTCTTCTATA CGGCCATTGT GTTCAATCCC
AAGGACACCG CTGACCAGCT CAAGAAGCAT TCCGGCTTTA TTCCGGGCAT TCGTCCGGGT
GAGCGTACGG CGGAATATAT AGACTATGTG TTGACGCGTA TCACAGTTGT CGGCGCCATC
TATATTGTGC TTGTCTGTCT CCTGCCGGAA TTCCTGATTT CCGCGACCGG TGTGCCATTC
TATCTTGGTG GTACCTCGCT GCTGATCGTT GTGAGCGTGA CGCTCGATAC GGTTGCGCAA
ATTCAGGGGC ATCTGATCGC TCATCAGTAT GAAGGGCTGA TCAAGAAGTC CAAACTCAGA
GGTGGGAAAC GTAATAGATG A
|
|---|
| Protein sequence | MASAAEQLVS NLNFSAFSKA EELKKRIWFT LGALLVYRFG TYIPLPGINP DALAQAFQQH
SQGVLGLFNM FAGGAVGRMA IFALGIMPYI SASIIVQLMT SVVPSLEALK KEGEAGRKII
NQYTRYGTVL LALVQAYAIS VGLQSGNGIV TNPGPFFIVS SVITLVGGTM FLMWLGEQIT
ARGIGNGISL IIFSGIVANL PHAISGTLEL GRTGALSTGL ILGVIVLAVA LVAVIVFVER
AQRRLLIQYP KRQVGNRMFQ GDTSHLPLKF NTAGVIPPIF ASSLLLLPAT VAGFANTTEM
PAWATTVLNA LGHGQPLYML FYAALMAFFC FFYTAIVFNP KDTADQLKKH SGFIPGIRPG
ERTAEYIDYV LTRITVVGAI YIVLVCLLPE FLISATGVPF YLGGTSLLIV VSVTLDTVAQ
IQGHLIAHQY EGLIKKSKLR GGKRNR
|
|---|
| |