| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BOV_0480 |
|---|
| Symbol | ispH |
|---|
| ID | 5201551 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brucella ovis ATCC 25840 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009505 |
|---|
| Strand | + |
|---|
| Start bp | 494695 |
|---|
| End bp | 495813 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640577513 |
|---|
| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
|---|
| Protein accession | YP_001258492 |
|---|
| Protein GI | 148560661 |
|---|
| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0761] Penicillin tolerance protein |
|---|
| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.531378 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAA GCCGTAAATC GCATGACAGG TCCGTCCTGC GTTTTTTGCG TCATCTACTG
GAAAACGAGT ACGCCATAAT GACCCAACAG CGCCCCCCTC TGGAGATCCG CCTTTGCGGC
CCGCGCGGCT TTTGCGCAGG TGTGGACCGG GCCATCCAGA TTGTCGTCCT GGCGCTCAAA
AAATATGGTG CGCCGGTTTA TGTGCGCCAT GAGATCGTGC ACAATCGTTA TGTGGTCGAG
GGGCTTCAGG CCCGCGGCGC GATCTTCGTC GAGGAACTGG ATGAAATCCC GGCGGCACAC
CGCAACCAGC CGGTGGTGTT TTCCGCCCAT GGTGTGCCAA AATCCGTGCC AGCGGACGCG
GAGGCCAAGA ACCTCTTTTA TCTTGATGCG ACATGCCCAC TGGTTTCCAA GGTGCACAAA
CAGGCCATGC GCCACCAGCG CCTTGGCCGC CATGTCATCC TGATCGGCCA TTCCGGCCAC
CCGGAAGTGA TCGGCACGAT GGGGCAATTG CCGGATGGCG CGGTCACGCT GATTGAAACC
GTCGAGGATG CGCACACCTG CCATTTCGAT GATGAAGACA ATCTTGGCTT CGTCACGCAG
ACCACGCTGT CGGTGGATGA CACGGCGGGT ATCATCAAGG AATTGCAGGC GCGCTTTCCC
AATCTGGCGG CTCCGGCGGC GGAATCGATC TGCTACGCCA CCACCAACCG GCAGGATGCT
GTGCGTGCGG CGGCGCCGGG CTGCGATCTG TTTCTGATTG TCGGTGCACC GAATTCCTCC
AATTCCAAGC GTCTGGTCGA GGTGGCGGAA AAGGCGGGCG CGCGCATGCC CATGCTGGTG
CAGCGCGCGG AGGATATAGA ATGGGAGCAG ATCGGCGATA TTTCCGTCGT TGGCCTTTCG
GCTGGCGCGT CTGCGCCCGA AATCATCGTG GATGAAATCA TCGATGCCTT CAAAGCCCGC
TTCGATGTGA AGATCGAACT GGCGGAAACA ACGGTTGAAA CCGAAAATTT CCTTGTGAAT
CGCGAAATCC GCGATGTGGA ATTGACGGTG AAGGATATGG CATTCGTCAA TGGCGAGCAC
CGCGTGGTCG GCATTTCCAA ACTTATGCAG GGGAAGTAA
|
|---|
| Protein sequence | MEKSRKSHDR SVLRFLRHLL ENEYAIMTQQ RPPLEIRLCG PRGFCAGVDR AIQIVVLALK
KYGAPVYVRH EIVHNRYVVE GLQARGAIFV EELDEIPAAH RNQPVVFSAH GVPKSVPADA
EAKNLFYLDA TCPLVSKVHK QAMRHQRLGR HVILIGHSGH PEVIGTMGQL PDGAVTLIET
VEDAHTCHFD DEDNLGFVTQ TTLSVDDTAG IIKELQARFP NLAAPAAESI CYATTNRQDA
VRAAAPGCDL FLIVGAPNSS NSKRLVEVAE KAGARMPMLV QRAEDIEWEQ IGDISVVGLS
AGASAPEIIV DEIIDAFKAR FDVKIELAET TVETENFLVN REIRDVELTV KDMAFVNGEH
RVVGISKLMQ GK
|
|---|
| |