Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH9_1759 |
Symbol | |
ID | 5169420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH9 |
Kingdom | Bacteria |
Replicon accession | NC_009487 |
Strand | - |
Start bp | 1865704 |
End bp | 1868901 |
Gene Length | 3198 bp |
Protein Length | 1065 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640566102 |
Product | DNA polymerase III, alpha subunit |
Protein accession | YP_001247125 |
Protein GI | 148268182 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0587] DNA polymerase III, alpha subunit |
TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.463991 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTGGCAT ATTTAAATAT TCATACGGCT TATGATTTGT TAAATTCAAG CTTAAAAATA GAAGATGCCG TAAGACTTGC TGTGTCTGAA AATGTTGATG CACTTGCCAT AACTGACACC AATGTATTGT ATGGTTTTCC TAAATTTTAT GATGCATGTA TAGCAAATAA CATTAAACCG ATTTTTGGTA TGACAATATA TGTGACAAAT GGATTAAATA CAGTCGAAAC AGTTGTTCTA GCTAAAAATA ATGATGGATT AAAAGATTTG TATCAACTAT CATCGGAAAT AAAAATGAAT TCAATGGAAA ATGTTTCATT TGAACTATTG CAACAATTTT CATCGAATTT GATTATCATT TTTAAAAATG TTGCAGACGA ACATCGTGAC ATTGTTCAAG TTTTTGATTC GCATGAAGAT ACGTATTTAG ATCATCAAAG TGTTTTAGTT CAGGGTATAA AGCACGTATG GATTCAAAAT GTTTGTTACC AAACACGTCA AGATGCCGAT ACGATTTCTG CATTAGCAGC TATTAGAGAC AATGCAAAAT TAGACTTAAT TCATGATCAA GAAGATTTTG GTGCACATTT TTTAACTGAA AAGGAAATTA AACAATTAGA TATTAACCAA GAATATTTAA CGCAGGTTGA TGTTATAGCT CAAAAGTGTA ATGCAGAATT AAAATATCAT CAATCTCTAC TTCCTCAATA TCAGACACCT AACGATGAAT CAGCTAAAAA ATATTTGTGG CGTGTCTTAG TTACACAATT GAAAAAATTA GAACTTAATT ATGACGTCTA TTTAGAGCGA TTGAAATATG AGTATAAAGT TATTACTAAT ATGGGTTTTG AAGATTATTT CTTAATAGTA AGTGATTTAA TCCATTATGC GAAAACGAAT GATGTGATGG TAGGTCCAGG TCGTGGTTCT TCAGCTGGCT CACTGGTCAG TTATTTACTA GGTATTACAA CGATTGATCC TATTAAATTC AATCTATTAT TTGAACGTTT TTTAAACCCA GAACGTGTAA CAATGCCTGA TATAGATATT GACTTTGAAG ATACACGCCG AGAAAGGGTT ATTCAGTACG TCCAAGAAAA ATATGGCGAG CTACATGTAT CTGGAATTGT GACTTTCGGT CATCTGCTTG CAAGAGCGGT TGCTAGGGAT GTTGGACGAA TTATGGGGTT TGATGAAGTT ACATTAAATG AAATTTCAAG TTTAATCCCA CATAAATTAG GAATTACACT TGATGAAGCA TATCAAATTG ACGATTTTAA AAAATTTGTA CATCGAAACC ATCGACATGA ACGCTGGTTC AGTATTTGTA AAAAGTTAGA AGGTTTACCA AGACATACAT CTACACATGC GGCAGGAATT ATTATTAATG ACCATCCATT ATATGAATAT GCCCCTTTAA CGAAAGGGGA TACAGGATTA TTAACGCAAT GGACAATGAC TGAAGCCGAA CGAATTGGGT TATTAAAAAT AGATTTTCTA GGGTTGAGAA ACTTATCGAT TATTCATCAA ATCTTAATAC AAGTCAAAAA AGATTTAGGT ATTAATATTG ATATCGAAAA GATTCCGTTC GATGATCAAA AAGTGTTTGA ATTGTTGTCG CAAGGAGATA CGACTGGCAT ATTCCAATTA GAGTCAGACG GTGTAAGAAG TGTATTAAAA AAATTAAAGC CGGAACACTT TGAAGATATT GTTGCTGTAA CTTCTTTGTA TAGACCAGGT CCAATGGAAG AAATTCCAAC TTACATTACA AGAAGACATG ATCCAAGCAA AGTTCAATAT TTACATCCAC ATTTAGAACC TATATTAAAA AATACTTACG GTGTTATTAT TTATCAAGAG CAAATTATGC AAATAGCGAG CACATTTGCA AACTTCAGTT ATGGTGAAGC GGATATTTTA AGAAGAGCAA TGAGTAAAAA AAATAGAGCT GTTCTTGAAA GTGAGCGTCA ACATTTTATA GAAGGTGCAA AGCAAAATGG TTATCACGAA GACATTAGTA AGCAAATATT TGATTTGATT CTGAAATTTG CTGATTATGG TTTTCCTAGA GCACATGCTG TCAGCTATTC TAAAATTGCA TACATTATGA GCTTTTTAAA AGTCCATTAT CCAAATTATT TTTACGCAAA TATTTTAAGT AATGTTATTG GAAGTGAGAA GAAAACTGCT CAAATGATAG AAGAAGCAAA AAAACAAGGT ATCACTATAT TGCCACCGAA CATTAACGAA AGTCATTGGT TTTATAAACC TTCCCAAGAA GGCATTTATT TATCAATTGG TACAATTAAA GGTGTTGGTT ATCAAAGTGT GAAAGTGATT GTTGATGAAC GTTATCAGAA CGGCAAATTT AAAGATTTCT TTGATTTTGC TAGACGTATA CCGAAGAGAG TCAAAACGAG AAAGTTACTT GAAGCACTGA TTTTAGTGGG AGCGTTTGAT GCTTTTGGTA AAACACGTTC AACGTTGTTG CAAGCTATTG ATCAAGTGTT GGATGGCGAT TTAAACATTG AACAAGATGG TTTTTTATTT GATATTTTAA CGCCAAAACA GATGTATGAA GATAAAGAAG AATTGCCTGA TGCACTTATT AGTCAGTACG AAAAAGAATA TTTAGGATTT TATGTTTCGC AACACCCAGT AGATAAAAAG TTTGTTGCCA AACAATATTT AACGATATTT AAATTGAGTA ACGCGCAGAA TTATAAACCT ATATTAGTAC AGTTTGATAA AGTTAAACAA ATTCGAACTA AAAATGGTCA AAATATGGCA TTCGTCACAT TAAATGATGG CATTGAAACT TTAGATGGTG TGATTTTCCC TAATCAGTTT AAAAAGTACG AAGAGTTGTT ATCACATAAT GACTTGTTTA TAGTTAGCGG GAAATTTGAC CATAGAAAGC AACAACGTCA ACTAATTATA AATGAGATTC AGACATTAGC CACTTTTGAA GAACAAAAAT TAGCATTTGC CAAACAAATT ATAATTAGAA ATAAATCACA AATAGATATG TTTGAAGAGA TGATTAAAGC TACGAAAGAG AATGCTAATG ATGTTGTGTT ATCCTTTTAT GATGAAACGA TTAAACAAAT GACTACTTTA GGCTATATTA ATCAAAAAGA TAGTATGTTT AATAATTTTA TACAATCCTT TAACCCTAGT GATATTAGGC TTATATAA
|
Protein sequence | MVAYLNIHTA YDLLNSSLKI EDAVRLAVSE NVDALAITDT NVLYGFPKFY DACIANNIKP IFGMTIYVTN GLNTVETVVL AKNNDGLKDL YQLSSEIKMN SMENVSFELL QQFSSNLIII FKNVADEHRD IVQVFDSHED TYLDHQSVLV QGIKHVWIQN VCYQTRQDAD TISALAAIRD NAKLDLIHDQ EDFGAHFLTE KEIKQLDINQ EYLTQVDVIA QKCNAELKYH QSLLPQYQTP NDESAKKYLW RVLVTQLKKL ELNYDVYLER LKYEYKVITN MGFEDYFLIV SDLIHYAKTN DVMVGPGRGS SAGSLVSYLL GITTIDPIKF NLLFERFLNP ERVTMPDIDI DFEDTRRERV IQYVQEKYGE LHVSGIVTFG HLLARAVARD VGRIMGFDEV TLNEISSLIP HKLGITLDEA YQIDDFKKFV HRNHRHERWF SICKKLEGLP RHTSTHAAGI IINDHPLYEY APLTKGDTGL LTQWTMTEAE RIGLLKIDFL GLRNLSIIHQ ILIQVKKDLG INIDIEKIPF DDQKVFELLS QGDTTGIFQL ESDGVRSVLK KLKPEHFEDI VAVTSLYRPG PMEEIPTYIT RRHDPSKVQY LHPHLEPILK NTYGVIIYQE QIMQIASTFA NFSYGEADIL RRAMSKKNRA VLESERQHFI EGAKQNGYHE DISKQIFDLI LKFADYGFPR AHAVSYSKIA YIMSFLKVHY PNYFYANILS NVIGSEKKTA QMIEEAKKQG ITILPPNINE SHWFYKPSQE GIYLSIGTIK GVGYQSVKVI VDERYQNGKF KDFFDFARRI PKRVKTRKLL EALILVGAFD AFGKTRSTLL QAIDQVLDGD LNIEQDGFLF DILTPKQMYE DKEELPDALI SQYEKEYLGF YVSQHPVDKK FVAKQYLTIF KLSNAQNYKP ILVQFDKVKQ IRTKNGQNMA FVTLNDGIET LDGVIFPNQF KKYEELLSHN DLFIVSGKFD HRKQQRQLII NEIQTLATFE EQKLAFAKQI IIRNKSQIDM FEEMIKATKE NANDVVLSFY DETIKQMTTL GYINQKDSMF NNFIQSFNPS DIRLI
|
| |