| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH9_1410 |
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| Symbol | |
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| ID | 5168648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus aureus subsp. aureus JH9 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009487 |
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| Strand | + |
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| Start bp | 1471277 |
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| End bp | 1472923 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640565756 |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_001246780 |
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| Protein GI | 148267837 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000212445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTCTT CTTCACCAGA GAATCCAAAT GGAAAGAAGT ATTCACCAGT CTTCATCTAT
AGTGCAATTG TTGTTGCTAT AGTCGTATTA CTTGGTGCAT TTTTACCTGA ACAATTCAAC
TATGTTACCA ATAATATTAA AATGTGGATT ACAGAAAAGT TAGGTTGGTA TTATCTTATT
CTTACTACGA TTATCGTGTT CTTCTGTATA TTCCTTATTT TTAGTCCTAT TGGAAAACTT
AAACTAGGTA AACCAAATGA CAAACCTGAG TTTAATACAA TTTCATGGTT TGCTATGTTG
TTTAGTGCTG GTATGGGGAT AGGTTTGGTG TTTTATGGTG CAGCTGAACC GATGGCGCAC
TTTGCTACGC CACCTACAGC AGATCCCAAA ACTACTGAAG CTTATACTGA AGCTCTACGT
TCAACATTTT TCCATTGGGG ATTCCATGCT TGGGCTGTTT ATGGTGTTGT TGCGTTAGCG
TTGGCATATT CGCAATTCCG TAAAGGTGAA CCAGGTTTAT TATCTAGAAC TTTACGTCCT
CTTTTAGGTG ATAAAGTAGA AGGTCCTATT GGGATTTTTA TTGACGTTTT ATCTGTATTT
GCGACAATCG TTGGGGTAGC CGTTTCGTTA GGTATGGGTG CTCTACAAAT TAATGGTGGT
TTACATTACT TGTTCAATGT TCCAAACAAT ACGTTTGTAC AAGCGATTAT CATCATTGTT
GTTACTATCT TATTTATAGC AAGTGCATGG TCTGGATTAA GTAAAGGTAT TCAATACTTA
AGTAACTTGA ACATTGGTTT AGGTACTATT TTAATGGTAG CTGCTTTAAT TGTTGGACCA
ACTGTTCTTA TTTTAAATAT GTTAACTAGC TCTACGGGTA GTTTACTAAA CACATTCTTG
TTTAATAGTT TTGATACAGC TGCTTTAAAT CCTCAAAAAC GTGAATGGAT GTCTTCATGG
ACACTTTATT ACTGGGGTTG GTGGTTAAGT TGGAGCCCAT TCGTTGGAGT GTTTATTGCA
CGAGTTTCAA AAGGACGTTC AATTAGAGAG TTCATTTCTG GTGTCTTGCT AGTTCCAGCA
ATTGTTAGTT TTGTTTGGTT TAGTGTCTTT GGTGTATTAG GCATCGAGAC AGGTAAGAAA
CACAAAGAAA TTTTTGATAT GACTCCTGAA ACACAGCTAT TTGGAGTGTT TAATCATGTG
CCATTTGGCA TAGTTTTATC GTTGATTGCA TTATTATTAA TTGCATCATT CTTTATTACA
TCTGCTGACT CAGCAACATT TGTATTAGGA ATGCAAACAA CATTTGGTTC ATTAAATCCA
TCTAGTATGG TAAAAGTTGT TTGGGGAATT TCACAGGCCT TAATAGCATT TGTACTTTTA
TTAGCTGGTG GCGGTAATGG CGCTGAAGCT TTAAATGCGA TTCAAAGTGC TGCAATTATA
AGTGCATTCC CATTCTCCTT TGTCGTCATA CTCATGATGG TAAGTTTCTA CAAGGATGCG
AACCAGGAAC GTAAATTCCT AGGTTTAACA TTGACTCCGA ATAAACATCG CTTACAAGAA
TATATCAAGA GTCAACAAGA AGATTATGAA TCTGACATTC TTGAAAAGCG TCAGTCACGT
AGAAATATAG AGAAAAAAGA TAACTAA
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| Protein sequence | MNSSSPENPN GKKYSPVFIY SAIVVAIVVL LGAFLPEQFN YVTNNIKMWI TEKLGWYYLI
LTTIIVFFCI FLIFSPIGKL KLGKPNDKPE FNTISWFAML FSAGMGIGLV FYGAAEPMAH
FATPPTADPK TTEAYTEALR STFFHWGFHA WAVYGVVALA LAYSQFRKGE PGLLSRTLRP
LLGDKVEGPI GIFIDVLSVF ATIVGVAVSL GMGALQINGG LHYLFNVPNN TFVQAIIIIV
VTILFIASAW SGLSKGIQYL SNLNIGLGTI LMVAALIVGP TVLILNMLTS STGSLLNTFL
FNSFDTAALN PQKREWMSSW TLYYWGWWLS WSPFVGVFIA RVSKGRSIRE FISGVLLVPA
IVSFVWFSVF GVLGIETGKK HKEIFDMTPE TQLFGVFNHV PFGIVLSLIA LLLIASFFIT
SADSATFVLG MQTTFGSLNP SSMVKVVWGI SQALIAFVLL LAGGGNGAEA LNAIQSAAII
SAFPFSFVVI LMMVSFYKDA NQERKFLGLT LTPNKHRLQE YIKSQQEDYE SDILEKRQSR
RNIEKKDN
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