| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH9_1331 |
|---|
| Symbol | |
|---|
| ID | 5168037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009487 |
|---|
| Strand | + |
|---|
| Start bp | 1388367 |
|---|
| End bp | 1389284 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640565680 |
|---|
| Product | tRNA pseudouridine synthase B |
|---|
| Protein accession | YP_001246704 |
|---|
| Protein GI | 148267761 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0130] Pseudouridine synthase |
|---|
| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.284628 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATAATG GGATATTACC AGTATATAAA GAGCGCGGTT TAACAAGTCA TGACGTTGTA
TTCAAATTGC GTAAAATATT AAAAACTAAA AAAATAGGTC ACACGGGTAC GCTTGATCCC
GAAGTTGCAG GCGTGTTACC GGTATGTATA GGTAATGCAA CGAGAGTTAG TGATTATGTT
ATGGATATGG GCAAAGCTTA TGAAGCAACT GTATCGATAG GAAGAAGTAC AACGACTGAA
GATCAAACGG GTGATACATT GGAAACAAAA GGTGTACACT CAGCAGATTT TAATAAGGAC
GATATTGACC GATTGTTAGA AAATTTTAAA GGTGTTATTG AACAAATTCC GCCAATGTAT
TCATCAGTCA AGGTGAATGG CAAAAAATTA TATGAATATG CGCGTAATAA TGAAACAGTT
GAAAGACCAA AGCGTAAAGT TAATATTAAA GACATTGGGC GTATATCTGA ATTAGATTTT
AAAGAAAATG AGTGTCATTT TAAAATACGC GTCATCTGTG GTAAAGGTAC ATATATTAGA
ACGCTAGCAA CTGATATTGG TGTGAAATTA GGCTTTCCGG CACATATGTC GAAATTAACA
CGAATCGAGT CTGGTGGATT TGTGTTGAAA GATAGCCTTA CATTAGAACA AATAAAAGAA
CTTCATGAGC AGGATTCATT GCAAAATAAA TTGTTTCCTT TAGAATATGG ATTAAAGGGT
TTGCCAAGCA TTAAAATTAA AGATTCGCAC ATAAAAAAAC GTATTTTAAA TGGGCAGAAA
TTTAATAAAA ATGAATTTGA TAACAAAATT AAAGACCAAA TTGTATTTAT TGATGATGAT
TCAGAAAAAG TATTAGCAAT TTATATGGTA CACCCTACAA AAGAATCAGA AATTAAACCT
AAAAAAGTCT TTAATTAA
|
|---|
| Protein sequence | MYNGILPVYK ERGLTSHDVV FKLRKILKTK KIGHTGTLDP EVAGVLPVCI GNATRVSDYV
MDMGKAYEAT VSIGRSTTTE DQTGDTLETK GVHSADFNKD DIDRLLENFK GVIEQIPPMY
SSVKVNGKKL YEYARNNETV ERPKRKVNIK DIGRISELDF KENECHFKIR VICGKGTYIR
TLATDIGVKL GFPAHMSKLT RIESGGFVLK DSLTLEQIKE LHEQDSLQNK LFPLEYGLKG
LPSIKIKDSH IKKRILNGQK FNKNEFDNKI KDQIVFIDDD SEKVLAIYMV HPTKESEIKP
KKVFN
|
|---|
| |