| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH9_0967 |
|---|
| Symbol | |
|---|
| ID | 5167144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009487 |
|---|
| Strand | + |
|---|
| Start bp | 1014993 |
|---|
| End bp | 1018646 |
|---|
| Gene Length | 3654 bp |
|---|
| Protein Length | 1217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640565317 |
|---|
| Product | recombination helicase AddA |
|---|
| Protein accession | YP_001246344 |
|---|
| Protein GI | 148267401 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02785] recombination helicase AddA, Firmicutes type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAATTC CAGAGAAACC ACAAGGCGTG ATTTGGACTG ACGCGCAATG GCAAAGTATT
TACGCAACTG GACAAGATGT ACTTGTTGCA GCCGCGGCAG GTTCAGGTAA AACAGCTGTA
CTAGTTGAGC GTATTATCCA AAAGATTTTA CGTGATGGCA TTGATGTCGA TCGACTTTTA
GTCGTAACGT TTACAAACTT AAGCGCACGT GAAATGAAGC ATCGTGTAGA CCAACGTATT
CAAGAGGCAT CGATTGCTGA TCCTGCAAAT GCACACTTGA AAAACCAACG CATCAAAATT
CATCAAGCAC AAATATCTAC ACTTCATAGT TTTTGCTTGA AATTAATTCA ACAGCATTAT
GATGTATTAA ATATTGACCC GAACTTTAGA ACAAGCAGTG AAGCTGAAAA TATTTTATTA
TTAGAACAAA CGATAGATGA GGTCATAGAA CAACATTACG ATATCCTTGA TCCTGCTTTT
ATTGAATTAA CAGAACAATT GTCTTCAGAT AGAAGTGATG ATCAGTTTCG AATGATTATT
AAACAATTGT ATTTCTTTAG CGTTGCAAAT CCAAATCCTA CAAATTGGTT GGATCAATTG
GTGACACCAT ACGAAGAAGA AGCACAACAA GCGCAACTTA TTCAACTACT AACAGACTTA
TCTAAAGTAT TTATCACAGC TGCCTATGAT GCTTTAAATA AGGCGTATGA TTTGTTTAGT
ATGATGGATG GCGTCGATAA ACATTTAGCT GTTATAGAAG ATGAACGACG TTTAATGGGG
CGTGTTTTAG AAGGTGGTTT TATTGATATA CCTTATTTAA CTGATCACGA ATTTGGCGCG
CGTTTGCCTA ATGTAACAGC GAAAATTAAA GAAGCAAATG AAATGATGGT CGATGCCTTA
GAAGATGCTA AACTTCAGTA TAAAAAATAT AAATCATTAA TTGATAAAGT GAAAAATGAT
TACTTTTCAA GAGAAGCTGA TGATTTGAAA GCTGATATGC AACAATTGGC GCCACGAGTA
AAGTACCTTG CGCGTATTGT GAAAGATGTT ATGTCAGAAT TCAATCGAAA AAAGCGTAGC
AAAAATATTC TGGATTTTTC TGATTATGAA CATTTTGCAT TACAAATTTT AACTAATGAG
GATGGTTCGC CTTCAGAAAT TGCCGAATCA TACCGTCAAC ACTTTCAAGA AATATTGGTC
GATGAGTATC AAGATACGAA CCGGGTTCAA GAGAAAATAC TATCTTGCAT CAAAACGGGT
GATGAACATA ATGGTAATTT ATTTATGGTT GGAGATGTTA AGCAATCCAT TTATAAATTT
AGACAAGCTG ATCCAAGTTT ATTTATTGAA AAGTATCAAC GCTTTACTAT AGATGGAGAT
GGCACTGGAC GTCGAATTGA TTTGTCGCAA AACTTCCGTT CTCGAAAAGA AGTACTGTCA
ACGACTAACT ATATATTCAA ACATATGATG GATGAACAAG TCGGTGAAGT AAAATATGAT
GAAGCGGCAC AGTTGTATTA TGGTGCACCA TATGATGAAT CGGACCATCC AGTAAACTTA
AAAGTGCTTG TTGAAGCGGA TCAAGAACAT AGTGATTTAA CTGGTAGTGA ACAAGAAGCG
CATTTTATAG TAGAACAAGT TAAAGATATC TTAGAACATC AAAAAGTTTA TGATATGAAA
ACAGGAAGCT ATAGAAGTGC GACATACAAA GATATCGTTA TTCTAGAACG CAGCTTTGGA
CAAGCTCGCA ATTTACAACA AGCCTTTAAA AATGAAGATA TTCCATTCCA TGTGAATAGT
CGTGAAGGTT ACTTTGAACA AACAGAAGTC CGCTTAGTAT TATCATTTTT AAGAGCGATA
GATAATCCAT TACAAGATAT TTATTTAGTT GGGTTAATGC GCTCCGTTAT ATATCAGTTC
AAAGAAGACG AATTAGCTCA AATTAGAATA TTGAGTCCAA ATGATGACTA CTTCTATCAA
TCGATTGTAA ATTACATTAA TGACGAAGCA GCAGATGCTA TTTTAGTTGA TAAATTAAAA
ATGTTTTTAT CAGATATTCA AAGTTACCAA CAATATAGTA AAGATCATCC GGTGTATCAG
TTAATTGATA AATTTTATAA TGATCATTAT GTTATTCAAT ACTTTAGTGG ACTTATTGGT
GGACGTGGAC GACGTGCAAA CCTTTATGGT TTATTTAATA AAGCTATCGA GTTTGAGAAT
TCAAGTTTTA GAGGTTTATA TCAATTTATT CGTTTTATCG ATGAATTGAT TGAAAGAGGC
AAAGATTTTG GTGAGGAAAA TGTAGTTGGT CCAAACGATA ATGTTGTTAG AATGATGACA
ATTCATAGTA GTAAAGGTCT AGAGTTTCCA TTTGTCATTT ATTCTGGATT GTCAAAAGAT
TTTAATAAAC GTGATTTGAA ACAACCAGTT ATTTTAAATC AGCAATTTGG TCTCGGAATG
GATTATTTTG ATGTGGATAA AGAAATGGCA TTTCCATCTT TAGCTTCGGT TGCATATAAA
GCTGTTGCCG AAAAAGAACT TGTGTCAGAA GAAATGCGAT TAGTCTATGT AGCATTAACA
AGAGCGAAAG AACAACTTTA TTTAATTGGT AGAGTGAAAA ATGATAAATC GTTACTAGAA
CTAGAGCAAT TGTCTATTTC TGGTGAGCAC ATTGCTGTCA ATGAACGATT AACTTCACCA
AATCCGTTCC ATCTTATTTA TAGTATTTTA TCTAAACATC AATCTGCGTC AATTCCAGAT
GATTTAAAAT TTGAAAAAGA TATAGCACAA GTTGAAGATA GTAGTCGTCC GAATGTAAAT
ATTTCAATTA TATACTTTGA AGATGTGTCT ACAGAAACCA TTTTAGATAA TAATGAATAT
CGTTCGGTTA ATCAATTAGA AACTATGCAA AATGGTAATG AGGATGTTAA AGCACAAATT
AAACACCAAC TTGATTATCA ATATCCATAT GTAAATGATA CTAAAAAGCC ATCAAAACAA
TCTGTTTCTG AATTGAAAAG GCAATATGAA ACAGAAGAAA GTGGCACAAG TTACGAACGA
GTAAGACAAT ATCGTATCGG TTTTTCAACG TATGAACGAC CTAAATTTCT AAGTGAACAA
GGTAAACGAA AAGCGAATGA AATTGGTACG TTAATGCATA CAGTGATGCA ACATTTACCA
TTCAAAAAAG AACGCATATC TGAAGTTGAG TTACATCAGT ATATCGATGG ATTAATCGAT
AAACATATTA TCGAAGCAGA TGCGAAAAAA GATATCCGTA TGGATGAAAT AATGACATTT
ATCAATAGTG AGTTATATTC GATTATTGCT GAAGCAGAGC AAGTTTATCG TGAATTACCG
TTTGTAGTTA ACCAAGCATT AGTTGACCAA TTGCCACAAG GAGACGAAGA CGTCTCAATT
ATTCAAGGTA TGATTGACTT AATCTTTGTT AAAGATGGTG TGCATTATTT TGTAGACTAT
AAAACCGATG CATTTAATCG TCGCCGTGGG ATGACAGATG AAGAAATTGG TACACAATTA
AAAAATAAAT ATAAGATACA GATGAAATAT TATCAAAATA CGCTTCAAAC GATACTTAAT
AAAGAAGTTA AAGGTTATTT ATACTTCTTC AAATTTGGTA CATTGCAACT GTAG
|
|---|
| Protein sequence | MTIPEKPQGV IWTDAQWQSI YATGQDVLVA AAAGSGKTAV LVERIIQKIL RDGIDVDRLL
VVTFTNLSAR EMKHRVDQRI QEASIADPAN AHLKNQRIKI HQAQISTLHS FCLKLIQQHY
DVLNIDPNFR TSSEAENILL LEQTIDEVIE QHYDILDPAF IELTEQLSSD RSDDQFRMII
KQLYFFSVAN PNPTNWLDQL VTPYEEEAQQ AQLIQLLTDL SKVFITAAYD ALNKAYDLFS
MMDGVDKHLA VIEDERRLMG RVLEGGFIDI PYLTDHEFGA RLPNVTAKIK EANEMMVDAL
EDAKLQYKKY KSLIDKVKND YFSREADDLK ADMQQLAPRV KYLARIVKDV MSEFNRKKRS
KNILDFSDYE HFALQILTNE DGSPSEIAES YRQHFQEILV DEYQDTNRVQ EKILSCIKTG
DEHNGNLFMV GDVKQSIYKF RQADPSLFIE KYQRFTIDGD GTGRRIDLSQ NFRSRKEVLS
TTNYIFKHMM DEQVGEVKYD EAAQLYYGAP YDESDHPVNL KVLVEADQEH SDLTGSEQEA
HFIVEQVKDI LEHQKVYDMK TGSYRSATYK DIVILERSFG QARNLQQAFK NEDIPFHVNS
REGYFEQTEV RLVLSFLRAI DNPLQDIYLV GLMRSVIYQF KEDELAQIRI LSPNDDYFYQ
SIVNYINDEA ADAILVDKLK MFLSDIQSYQ QYSKDHPVYQ LIDKFYNDHY VIQYFSGLIG
GRGRRANLYG LFNKAIEFEN SSFRGLYQFI RFIDELIERG KDFGEENVVG PNDNVVRMMT
IHSSKGLEFP FVIYSGLSKD FNKRDLKQPV ILNQQFGLGM DYFDVDKEMA FPSLASVAYK
AVAEKELVSE EMRLVYVALT RAKEQLYLIG RVKNDKSLLE LEQLSISGEH IAVNERLTSP
NPFHLIYSIL SKHQSASIPD DLKFEKDIAQ VEDSSRPNVN ISIIYFEDVS TETILDNNEY
RSVNQLETMQ NGNEDVKAQI KHQLDYQYPY VNDTKKPSKQ SVSELKRQYE TEESGTSYER
VRQYRIGFST YERPKFLSEQ GKRKANEIGT LMHTVMQHLP FKKERISEVE LHQYIDGLID
KHIIEADAKK DIRMDEIMTF INSELYSIIA EAEQVYRELP FVVNQALVDQ LPQGDEDVSI
IQGMIDLIFV KDGVHYFVDY KTDAFNRRRG MTDEEIGTQL KNKYKIQMKY YQNTLQTILN
KEVKGYLYFF KFGTLQL
|
|---|
| |