| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH9_0957 |
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| Symbol | rocD |
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| ID | 5169379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus aureus subsp. aureus JH9 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009487 |
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| Strand | + |
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| Start bp | 1000838 |
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| End bp | 1002028 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640565307 |
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| Product | ornithine--oxo-acid transaminase |
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| Protein accession | YP_001246334 |
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| Protein GI | 148267391 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
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| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases
[TIGR01885] ornithine aminotransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.593517 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTAAAT CTGAAAAAAT TATTGAGTTA ACAAATCATT ACGGAGCACA TAATTATTTA
CCATTGCCAA TTGTCATTTC AGAAGCTGAA GGGGTATGGG TTAAAGATCC TGAAGGCAAT
AAATATATGG ATATGTTATC TGCATATTCC GCTGTTAACC AAGGTCATAG ACATCCGAAA
ATTATTCAAG CATTAAAAGA TCAAGCTGAT AAAGTGACTC TAGTTTCACG TGCTTTTCAT
AGTGATAACT TAGGTGAATG GTACGAAAAA ATTTGTAAAC TGGCAGGTAA AGATAAAGCT
TTACCAATGA ATACAGGTGC TGAAGCAGTA GAAACAGCTT TGAAAGCAGC ACGACGCTGG
GCATACGATG TTAAAGGAAT TGAGCCAAAT AAAGCAGAAA TCATTGCATT TAATGGTAAC
TTCCATGGTC GAACAATGGC GCCAGTTTCA TTATCTTCAG AAGCAGAATA CCAACGTGGT
TATGGTCCGT TATTAGATGG ATTTAGAAAA GTTGATTTTG GAGATGTAGA TGCATTGGAA
GCTGCAATTA ATGAAAATAC TGCAGCAGTT TTAGTAGAAC CAATTCAAGG TGAAGCGGGT
ATAAATATAC CGCCAGAAGG ATATTTGAAA GCAATTAGAG AATTATGTGA TGAACATAAT
GTCTTATTTA TTGCTGACGA AATCCAAGCA GGATTAGGTC GTTCGGGTAA ATTATTTGCT
ACGGATTGGG ATAATGTAAA ACCTGATGTC TATATTTTAG GTAAAGCACT AGGTGGTGGT
GTCTTCCCAA TTTCTGTTGT ATTAGCAGAT AAAGAAGTAT TAGATGTCTT TACACCTGGC
TCACATGGTT CAACATTTGG TGGTAATCCA CTTGCTTGTG CTGCATCAAT TGCTGCATTA
GATGTTATCG TTGATGAGGA TTTACCAGGG CGCTCTTTAG AATTAGGAGA TTATTTTAAA
GAACAATTAA AGCAAATTGA TCATCCATCA ATTAAAGAAG TCCGTGGACG TGGTTTGTTT
ATAGGTGTGG AACTTAATGA AAGTGCTAGA CCATATTGTG AAGCTTTGAA AGAAGAAGGC
TTATTATGTA AAGAAACGCA TGATACTGTC ATTCGTTTTG CACCACCATT AATTATTACT
AAAGAAGAAT TGGACCTTGC ACTTGAAAAA ATAAGACATG TATTTCAATA A
|
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| Protein sequence | MTKSEKIIEL TNHYGAHNYL PLPIVISEAE GVWVKDPEGN KYMDMLSAYS AVNQGHRHPK
IIQALKDQAD KVTLVSRAFH SDNLGEWYEK ICKLAGKDKA LPMNTGAEAV ETALKAARRW
AYDVKGIEPN KAEIIAFNGN FHGRTMAPVS LSSEAEYQRG YGPLLDGFRK VDFGDVDALE
AAINENTAAV LVEPIQGEAG INIPPEGYLK AIRELCDEHN VLFIADEIQA GLGRSGKLFA
TDWDNVKPDV YILGKALGGG VFPISVVLAD KEVLDVFTPG SHGSTFGGNP LACAASIAAL
DVIVDEDLPG RSLELGDYFK EQLKQIDHPS IKEVRGRGLF IGVELNESAR PYCEALKEEG
LLCKETHDTV IRFAPPLIIT KEELDLALEK IRHVFQ
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