| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH9_0805 |
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| Symbol | |
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| ID | 5169083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus aureus subsp. aureus JH9 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009487 |
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| Strand | + |
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| Start bp | 882672 |
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| End bp | 885044 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640565155 |
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| Product | ribonuclease R |
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| Protein accession | YP_001246183 |
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| Protein GI | 148267240 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.127645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTAA AGCAATCAAT AGAAGAGATT ATTAATCAAC CTGAATATGA ACCTATGTCA
GTGTCAGATT TTCAAGATGC ATTAGGTTTA AGTAGTGCCG ACTCATTTAG AGATTTAATT
AAGGTGCTCG TAGAATTAGA ACAATCAGGA TTAATTGAAC GTACAAAAAC AGACAGATAT
CAAAAAAAGC ATAGTTCAAA AGGTCATTCA AAATTGATAA AGGGAACGTT AAGTCAAAAT
AAAAAAGGCT TTGCATTCTT AAGACCTGAA GATGAGGATA TGGAAGATAT ATTTATTCCC
CCAACAAAAA TTAATCGTGC CTTAGATGGA GATACTGTAA TTGTAGAAAT ACATCAATCT
AAAGGTGAAC ATAAAGGTAA AATTGAAGGG GAAGTTAAGT CGATTGAGAA GCATTCAGTA
ACTCAAGTTG TTGGTACGTA TAGTGAAGCT AGACATTTCG GATTTGTTAT TCCAGATGAT
AAACGTATTA TGCAAGATAT TTTCATTCCT AAAGGACAAA GTTTAGGTGC AGTAGATGGG
CATAAGGTAC TTGTTCAAAT TACTAAATAT GCTGATGGTT CAGATAATCC AGAAGGACAT
ATTTCTGCTA TTTTAGGACA TAAAAATGAT CCTGGCGTAG ATATTTTATC TATTATCTAT
CAACATGGCA TAGAAATTGA ATTTCCTGAT GAAGTGTTAC AAGAAGCTGA AGCAGTACCT
GATCATATTG AAAATACTGA AATTAAAGGC CGTCATGATT TACGTGATGA ATTGACAATC
ACAATTGATG GTGCTGATGC TAAAGACTTA GATGACGCAA TTAGTGTTAA AAAGTTAGCG
AACGGTAATA CGCAGTTGAC TGTAAGTATT GCTGATGTCA GTTATTATGT AACTGAAGAT
TCAGCTTTAG ATAAAGAAGC TTATGATAGA GCGACAAGTG TATATCTTGT TGACCGTGTG
ATTCCGATGA TTCCACATCG ATTAAGCAAT GGTATTTGTT CATTAAATCC TCATGTTGAT
CGTTTAACGT TAAGCTGTCG CATGGAAATC GATGCTAGTG GTCGCGTTGT TAAACATGAA
ATTTTTGATA GTGTTATACA TTCTGATTAT CGAATGACGT ATGATGCGGT AAATCAGATT
ATTACTGAAA AGGATCCTAA CATTCGCGAA CAATATAAAG AAATTACGCC TATGTTAGAT
TTAGCACAAG ATTTATCTAA TCGTTTGATT CAAATGAGAA AACGACGTGG TGAAATCGAT
TTTGATATTA GTGAAGCAAA AGTATTAGTT AACGAAGTCG GTATACCAAC AGATGTTCAA
TTAAGACAAC GTGGCGAGGG TGAACGTCTA ATTGAATCAT TTATGTTAAT TGCAAATGAA
ACAGTTGCTG AACATTTTAG TAAGTTAAAT GTACCTTTTA TTTACCGAGT GCATGAGCAA
CCTAAATCAG ATCGCTTAAG ACAATTCTTT GATTTTATTA CAAACTTTGG CATCATGATT
AAGGGCACTG GCGAAGATAT TCATCCAACA ACACTTCAAA AGGTTCAAGA AGAAGTAGAA
GGTCGACCTG AACAAATGGT CATTTCAACA ATGATGTTAC GTTCAATGCA ACAAGCGCAT
TATGATGATG TGAACTTGGG ACATTTTGGC TTATCAGCTG AATATTATAC GCATTTTACA
TCACCAATTA GACGTTATCC TGATTTAACA GTTCATCGTT TAATCCGTAA GTATTTAATT
GAGAAATCAA TGGATAACAA AGAAGTGAAG CGTTGGGAAG ACAAATTGCC TGAGTTAGCT
GAACATACTT CTAAACGTGA ACGTCGTGCT ATTGAGGCAG AACGTGATAC TGATGAATTG
AAAAAAGCAG AATATATGAT TCAACATATT GGTGATGAAT TTGAAGGTAT TGTCAGCTCA
GTAGCTAACT TCGGTATGTT CATTGAATTG CCAAATACGA TAGAAGGTAT GGTTCATATT
GCGAATATGA CTGATGATTA TTACCGTTTT GAAGAGCGTC AAATGGCATT AATTGGTGAG
CGTCAAGCTA AAGTATTTAG AATTGGTGAC ACAGTTAAGG TTAAAGTGAC GCATGTTGAT
GTAGATGAAC GATTAATTGA TTTTCAAATT GTTGGAATGC CTTTACCTAA AAATGACCGC
TCACAGCGAC CAGCAAGAGG TAAAACGATT CAAGCTAAAA CGCGTGGCAA ATCTTTAGAT
AAATCGAAAT CTGATGATAA GGGTCGTAAG AAAAAAGGTA AGCAACGTAA AGGTAAAAAC
CAACGTAATA ATGATAAATC AGGTAATAGT AAGCATAAGC CATTTTATAA AGATAAAAGT
GTGAAAAAGA AAGCACGTCG TAAGAAAAAA TAA
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| Protein sequence | MNLKQSIEEI INQPEYEPMS VSDFQDALGL SSADSFRDLI KVLVELEQSG LIERTKTDRY
QKKHSSKGHS KLIKGTLSQN KKGFAFLRPE DEDMEDIFIP PTKINRALDG DTVIVEIHQS
KGEHKGKIEG EVKSIEKHSV TQVVGTYSEA RHFGFVIPDD KRIMQDIFIP KGQSLGAVDG
HKVLVQITKY ADGSDNPEGH ISAILGHKND PGVDILSIIY QHGIEIEFPD EVLQEAEAVP
DHIENTEIKG RHDLRDELTI TIDGADAKDL DDAISVKKLA NGNTQLTVSI ADVSYYVTED
SALDKEAYDR ATSVYLVDRV IPMIPHRLSN GICSLNPHVD RLTLSCRMEI DASGRVVKHE
IFDSVIHSDY RMTYDAVNQI ITEKDPNIRE QYKEITPMLD LAQDLSNRLI QMRKRRGEID
FDISEAKVLV NEVGIPTDVQ LRQRGEGERL IESFMLIANE TVAEHFSKLN VPFIYRVHEQ
PKSDRLRQFF DFITNFGIMI KGTGEDIHPT TLQKVQEEVE GRPEQMVIST MMLRSMQQAH
YDDVNLGHFG LSAEYYTHFT SPIRRYPDLT VHRLIRKYLI EKSMDNKEVK RWEDKLPELA
EHTSKRERRA IEAERDTDEL KKAEYMIQHI GDEFEGIVSS VANFGMFIEL PNTIEGMVHI
ANMTDDYYRF EERQMALIGE RQAKVFRIGD TVKVKVTHVD VDERLIDFQI VGMPLPKNDR
SQRPARGKTI QAKTRGKSLD KSKSDDKGRK KKGKQRKGKN QRNNDKSGNS KHKPFYKDKS
VKKKARRKKK
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