| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH9_0138 |
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| Symbol | |
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| ID | 5169786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus aureus subsp. aureus JH9 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009487 |
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| Strand | + |
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| Start bp | 163409 |
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| End bp | 165232 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640564468 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_001245521 |
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| Protein GI | 148266578 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACATT TATCTGTGAA ATTGCGGCTT TTAATACTAG CATTAATCGA TTCACTGATA
GTGACATTTT CAGTATTCGT AAGTTATTAC ATTTTAGAAC CGTATTTCAA AACATATTCT
GTCAAATTAT TAATATTGGC AGCTATATCA CTATTCATAT CGCATCATAT TTCAGCATTT
ATTTTTAATA TGTATCATCG AGCGTGGGAA TATGCCAGTG TGAGTGAATT GATTTTAATT
GTTAAAGCTG TGACGACATC TATCGTTATT ACGATGGTGG TCGTGACAAT TGTTACAGGC
AATAGACCGT TTTTTAGATT GTATTTAATT ACTTGGATGA TGCACTTGAT TTTAATAGGT
GGCTCAAGGT TATTTTGGCG TATTTATCGG AAATACCTTG GAGGTAAGTC ATTTAATAAG
AAGCCAACTT TAGTTGTTGG TGCTGGTCAA GCAGGTTCAA TGCTGATTAG ACAAATGTTG
AAAAGTGACG AAATGAAACT TGAACCGGTA TTAGCAGTCG ATGATGACGA ACATAAACGC
AATATCACAA TTACTGAGGG TGTAAAAGTC CAAGGTAAAA TTGCGGATAT TCCAGAACTA
GTGAGGAAAT ATAAGATTAA AAAAATCATC ATTGCAATTC CAACTATTGG TCAAGAGCGT
TTGAAAGAAA TTAATAATAT TTGCCATATG GATGGCGTTG AGTTATTGAA AATGCCAAAT
ATAGAAGACG TCATGTCTGG TGAGTTAGAA GTGAATCAAC TGAAAAAAGT TGAAGTAGAA
GATTTACTAG GCAGAGATCC TGTTGAATTA GATATGGATA TGATATCAAA TGAATTGACG
AATAAAACTA TTTTAGTTAC GGGTGCAGGT GGTTCAATAG GATCAGAAAT TTGTAGACAA
GTTTGTAATT TCTATCCAGA ACGTATTATT CTACTTGGCC ATGGTGAAAA CAGTATTTAT
TTAATCAATC GTGAATTGCG AAATCGCTTC GGAAAAAATG TTGATATCGT TCCTATTATA
GCGGATGTGC AAAATAGAGC GCGTATGTTT GAAATTATGG AAACGTATAA ACCATACGCA
GTTTATCATG CAGCAGCACA CAAGCACGTG CCGTTAATGG AAGACAACCC TGAAGAAGCA
GTACATAATA ATATTTTAGG TACGAAAAAT ACTGCTGAAG CTGCTAAAAA TGCAGAGGTA
AAGAAATTCG TTATGATTTC TACGGATAAA GCCGTTAATC CGCCTAATGT CATGGGAGCT
TCAAAGCGAA TTGCAGAAAT GATTATTCAA AGTTTAAATG ATGAAACGCA TCGAACAAAT
TTTGTTGCAG TGAGATTTGG TAATGTACTT GGATCGAGAG GATCTGTGAT TCCACTTTTC
AAAAGTCAAA TTGAAGAAGG TGGGCCAGTT ACTGTGACAC ATCCTGAAAT GACACGTTAC
TTTATGACAA TTCCTGAAGC TTCTAGACTA GTTTTGCAGG CAGGGGCATT AGCAGAAGGT
GGCGAAGTAT TTGTGCTAGA TATGGGAGAA CCAGTGAAAA TTGTAGATTT GGCACGTAAT
TTAATTAAGC TAAGTGGTAA AAAAGAAGAC GACATACGCA TTACTTATAC AGGGATTAGA
CCCGGCGAAA AAATGTTTGA AGAGCTTATG AATAAAGATG AGGTTCATCC TGAACAAGTA
TTTGAAAAAA TTTATCGTGG CAAAGTACAA CATATGAAAT GTAATGAAGT TGAAGCGATT
ATTCAAGACA TCGTCAATGA CTTTAGTAAA GAAAAAATTA TTAACTATGC CAATGGCAAA
AAGGGAGATA ATTATGTTCG ATGA
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| Protein sequence | MAHLSVKLRL LILALIDSLI VTFSVFVSYY ILEPYFKTYS VKLLILAAIS LFISHHISAF
IFNMYHRAWE YASVSELILI VKAVTTSIVI TMVVVTIVTG NRPFFRLYLI TWMMHLILIG
GSRLFWRIYR KYLGGKSFNK KPTLVVGAGQ AGSMLIRQML KSDEMKLEPV LAVDDDEHKR
NITITEGVKV QGKIADIPEL VRKYKIKKII IAIPTIGQER LKEINNICHM DGVELLKMPN
IEDVMSGELE VNQLKKVEVE DLLGRDPVEL DMDMISNELT NKTILVTGAG GSIGSEICRQ
VCNFYPERII LLGHGENSIY LINRELRNRF GKNVDIVPII ADVQNRARMF EIMETYKPYA
VYHAAAHKHV PLMEDNPEEA VHNNILGTKN TAEAAKNAEV KKFVMISTDK AVNPPNVMGA
SKRIAEMIIQ SLNDETHRTN FVAVRFGNVL GSRGSVIPLF KSQIEEGGPV TVTHPEMTRY
FMTIPEASRL VLQAGALAEG GEVFVLDMGE PVKIVDLARN LIKLSGKKED DIRITYTGIR
PGEKMFEELM NKDEVHPEQV FEKIYRGKVQ HMKCNEVEAI IQDIVNDFSK EKIINYANGK
KGDNYVR
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