Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH9_0121 |
Symbol | |
ID | 5167542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH9 |
Kingdom | Bacteria |
Replicon accession | NC_009487 |
Strand | - |
Start bp | 143778 |
End bp | 144533 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640564451 |
Product | regulatory protein GntR, HTH |
Protein accession | YP_001245504 |
Protein GI | 148266561 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000430087 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAGGTTG TCTACGTGAC GCAAACACAA CCAAAATTTT TAACGATTTA TAATACGTTA TATAAAGAAA TTCAAATAGG AAAATATCCG AGTGGCCATG CATTACCTAC TGAAAAGGAA CTTTGTGCGC GCTTTGATGT CAGTCGTATG ACTTTGCGCC AAGCTATAAA ATTGTTAGCC GAAGATGGCA TCGTAGAGAG TACAAGAGGG AAGGGACACT TTGTTATTCC ACAAACAAAT GCCCAACACG CTTCAAGTAT GGATCAATTT AAGCATCCAC TTGATCAAAT ATTGCTAGCT CGCGTATCTA TGTCATCAAT TAATTATCGT GTTGATTTAG AAAGTGAATA TACAAATCAT TTGTTTGCAA ACCATCCTTC TGCCGTCATT GCAATGGAAC GCTATTATCA AAAAAAGGAC AATCATTCTA AGCAAGCTGA TGCATTTTGC TTTACCTTTA TACCGTTAAA TGTCATTGAC ACATTTAAAG TGAATACACA AAACGAAGAC GACATGAAGA CATTCGTTGA GCAAACGATT TATAGCAATG CATATCAATC AGATTTAAAA ATGTCTATTA CCAAAGCGCC CCGCTTCAAA AATCATAGTC ACGTGTTTGA TGGTGATACA CATTGTTGGC TGATTATTGA AACACTGTAC GCACAAACAC CTTATCCAAT TATGATTAAT AAGTGGTATA TTCCACAGGA AATATCTGAA TTAACACTGA CACGTATAAG ACAATCGGAT TATTAA
|
Protein sequence | MEVVYVTQTQ PKFLTIYNTL YKEIQIGKYP SGHALPTEKE LCARFDVSRM TLRQAIKLLA EDGIVESTRG KGHFVIPQTN AQHASSMDQF KHPLDQILLA RVSMSSINYR VDLESEYTNH LFANHPSAVI AMERYYQKKD NHSKQADAFC FTFIPLNVID TFKVNTQNED DMKTFVEQTI YSNAYQSDLK MSITKAPRFK NHSHVFDGDT HCWLIIETLY AQTPYPIMIN KWYIPQEISE LTLTRIRQSD Y
|
| |