Gene SaurJH9_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaurJH9_0004 
SymbolrecF 
ID5167370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus aureus subsp. aureus JH9 
KingdomBacteria 
Replicon accessionNC_009487 
Strand
Start bp3967 
End bp5079 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content34% 
IMG OID640564339 
Productrecombination protein F 
Protein accessionYP_001245394 
Protein GI148266451 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.320094 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTAA ATACACTCCA ATTAGAAAAT TATCGTAACT ATGATGAGGT TACGTTGAAA 
TGTCATCCTG ACGTGAATAT CCTCATTGGA GAAAATGCAC AAGGAAAGAC AAATTTACTT
GAATCAATTT ATACCTTAGC TTTAGCAAAA AGTCATAGAA CGAGTAATGA TAAGGAACTC
ATACGTTTTA ATGCTGATTA TGCTAAAATA GAAGGTGAGC TTAGTTATAG ACACGGCACG
ATGCCATTAA CAATGTTTAT AACTAAAAAA GGTAAACAAG TCAAAGTGAA TCACTTAGAG
CAAAGTCGTC TAACTCAATA TATTGGACAC CTCAATGTGG TTCTATTTGC GCCAGAAGAT
TTGAATATTG TAAAAGGCTC TCCTCAAATA AGACGACGCT TTATAGATAT GGAGTTGGGC
CAAATTTCTG CTGTTTACTT AAATGATTTA GCTCAATACC AACGTATTTT AAAGCAAAAG
AATAATTACT TAAAGCAGTT ACAATTAGGC CAAAAAAAGG ACTTAACAAT GTTGGAAGTA
TTAAATCAGC AGTTTGCTGA ATATGCAATG AAAGTAACTG ATAAACGTGC ACATTTTATT
CAAGAGCTAG AGTCGTTAGC TAAACCGATT CATGCTGGTA TCACAAATGA TAAAGAAGCG
TTGTCGCTAA ATTATTTACC TAGTCTTAAA TTTGATTATG CTCAAAATGA AGCGGCACGA
CTTGAAGAAA TTATGTCTAT TCTTAGCGAT AATATGCAAA GAGAAAAAGA ACGAGGCATT
AGCTTATTCG GACCACATCG AGATGATATA AGTTTTGATG TGAATGGCAT GGATGCTCAA
ACATATGGTT CTCAAGGACA GCAACGTACA ACGGCTTTGT CCATTAAATT AGCTGAAATT
GAGTTAATGA ATATCGAAGT TGGGGAATAT CCCATCTTAT TATTAGACGA TGTACTCAGT
GAATTAGATG ATTCGCGTCA AACGCATTTA TTAAGTACGA TTCAGCATAA AGTACAAACA
TTTGTCACTA CGACATCTGT AGATGGTATT GATCATGAAA TCATGAATAA CGCTAAATTG
TATCGTATTA ATCAAGGTGA AATTATAAAG TAA
 
Protein sequence
MKLNTLQLEN YRNYDEVTLK CHPDVNILIG ENAQGKTNLL ESIYTLALAK SHRTSNDKEL 
IRFNADYAKI EGELSYRHGT MPLTMFITKK GKQVKVNHLE QSRLTQYIGH LNVVLFAPED
LNIVKGSPQI RRRFIDMELG QISAVYLNDL AQYQRILKQK NNYLKQLQLG QKKDLTMLEV
LNQQFAEYAM KVTDKRAHFI QELESLAKPI HAGITNDKEA LSLNYLPSLK FDYAQNEAAR
LEEIMSILSD NMQREKERGI SLFGPHRDDI SFDVNGMDAQ TYGSQGQQRT TALSIKLAEI
ELMNIEVGEY PILLLDDVLS ELDDSRQTHL LSTIQHKVQT FVTTTSVDGI DHEIMNNAKL
YRINQGEIIK