| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1802 |
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| Symbol | |
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| ID | 5171449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1813058 |
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| End bp | 1813972 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640564323 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001245378 |
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| Protein GI | 148270918 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGTGG AAGTCACCAA GGAGAATTTC TACAGAAGAC TGGACAAATT TCTGAGGAAC
CAGCTGAAAG ACGTACCCCT TTCGGTGATA TACAAGCTCA TCAGAAAGGG AAAAGTGTAT
GTCAACGGAA AACGTGTGAA GGATCCTTCC TTCGATTTGG AAGAAGGAGA TGTGGTGGAA
TTCCGGTATG TGAATCTGGA AAATCTTCCG AAGAGATCCG AGAAGAAGGA TCTCACTCCA
GTTCCCATGA AACTCGATGT ACTCTACGAA GGCAAGCACT ATCTTGTGTT GAACAAGCCG
CCAAACATAG CCATACATCC TGGGAAAGGG GTTCATGTCG CGACATTGAT CGAAGGACTC
CTTCACTACG GTCAGGAAAA GGGATTTTCA CCGTTCCTCG TTCACAGACT CGACAAAGAC
ACCTCCGGGC TTCTCGTTGT CGCCAAAGAT AGAGAGGCCG CGAGGATTCT CACAGAGTTG
TTCAAGGACA GAAACATAGA GAAAGAATAC GTTACGCTCG TGAGAGGAAC TCCTGAGAAC
AACATGAAAA TCACCATTCC TCTCGATGGA CAGGAAGCGA TCTCTGAGAT CGTCTCAGTG
AAATCTCTGA GAGATGTTTC ACTCCTCAGG GTGAAAATAC ACACAGGCAG AAAGCACCAG
ATAAGAAGAC ACCTTTCACA GATAGGTTTT CCCGTTGTGG GAGACGATAC CTACGGTGAC
AGACATTTCA ACAGGGAATT TCGAAAGAGA TACGGTTTGA AAAGACTGTT CCTCCACAGC
TACAGAATGA AGTTCATCGA TCCGTGGACT GAAGAGGAGA AGGATTTCAG AGCACCCCTT
CCAGATGATC TTCTCAGCGT TTTGAATTTT TTAGAAGAGA GGAGTGATGA ATGGTTAGAA
GAATTTCTCT CCTGA
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| Protein sequence | MRVEVTKENF YRRLDKFLRN QLKDVPLSVI YKLIRKGKVY VNGKRVKDPS FDLEEGDVVE
FRYVNLENLP KRSEKKDLTP VPMKLDVLYE GKHYLVLNKP PNIAIHPGKG VHVATLIEGL
LHYGQEKGFS PFLVHRLDKD TSGLLVVAKD REAARILTEL FKDRNIEKEY VTLVRGTPEN
NMKITIPLDG QEAISEIVSV KSLRDVSLLR VKIHTGRKHQ IRRHLSQIGF PVVGDDTYGD
RHFNREFRKR YGLKRLFLHS YRMKFIDPWT EEEKDFRAPL PDDLLSVLNF LEERSDEWLE
EFLS
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