| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1778 |
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| Symbol | |
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| ID | 5171404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1784464 |
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| End bp | 1788522 |
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| Gene Length | 4059 bp |
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| Protein Length | 1352 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640564299 |
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| Product | alpha-2-macroglobulin domain-containing protein |
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| Protein accession | YP_001245354 |
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| Protein GI | 148270894 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2373] Large extracellular alpha-helical protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000145479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAGTT TGTTTTTTTC TTTCATGGTC TTTATGGCTG CTTTTCTCTT TGGAGGATAT
GCGTATTTTT CCGGAGATCC TATACTGCGA GTTGGTGAAG GAATTTCTTT CGTCGTTTCG
GACATGGAAA ATGTTGTCTT GAATGTGTGG AAAGTGGAAG ACGAAGAGAC ATTCTTGAAA
GCCGTCCTCA CCGAAGAAAA TTTCGATTTC TGGTGGCAGG AGAACAATCC CCTTGTTTAC
AGAAAAACAT TCTCTTCAAG GAACGAGTGG AAAGAATTCT CCGTTCCTTT GAAAGAAAAG
GGCTTTTATT TTGCCACTTT GACAACCCCG TTGGCAGGAA CGTCTGTGAT AACAAGAGAA
CTCGACAGGG GATTGTTCAT CGTTACCGAT CTTGAGGTGA TTTACTTTTC CGATGGAAGC
AGGACCATGC TCCATGTTTT TGATATCGAC GATGGTTTCG CGGAAAAAGC AGAAGTGTTC
TTGTACAGAG ATTCAATATT AGTTGGCAGA CTTTTCACCG ATGAATATGG AACCGTCGAA
GTCAACGATC GTTTCGATAC GGTTTATGTC AGGTATAAAG ACTCTCGCTT CATTGGTAAT
GTGTATTCCC CTAGAAGATT TGTTGAAGAT GAGAAACTCT TTCTCATCAC GGACCGACCC
ATTTATAAAC CGTCCGATAC TGTTTACTTC AGAGGACAAC TTTTCAAGGT TGATGGGAAC
GTGTACAGGG CTTTTGAAAG CACAGGAGTA ACCGTGACTG TTTTCGACAC GAAGGAAAAC
GAGATCTACA GGTCAACTTT TGAAACCAGT GCACTCGGAG GCTTCAGCGG AGATTTGAAA
TTACCAGACA CGGCTCCAGT TGGTCTTTAC AGGATAAAGA TCGAGCATGG TGAGAACACG
TTCTGGGAGA ATTTCCTGGT TGAGGAGTAC AGAAAGCCAG AATACAGAGT AAACATCGAA
ACCGACAGGG AAACGTACAT ATCTGGAGAA GTTATAAACT ATCGGATCAG GGTAAAGTAT
TTCAACGATC AGCCGGTCGA AAAAGCAGAG GTTGCCTATT ACGTTCATGC GTTTCCGGAA
GACGAAAATG GTTATCTGGT CTACAGAGGA ACAGGCTTTA CGAACGAAAA GGGAGTTCTG
GAGTTTGGCG TGAAGACCCA GGAAGGTTTT CAGGGAGTCT ACGCTCTGGA GGTCATCGTG
GTAGATGTGA GTCAGAGACA GATCGAAGAA AAAAAGACGG TAAAGGTATA CGCTGATGAC
GTTTTAATCT CTCCACAGGA CAGGTTCGTT TACACATCTC CTGGAAATCA GGTGAGGATG
ACTGTGAAGG TAACGGATCT GTCAGGAAAC CCTCTGGAAG GTGTTCTCTA CGTCCTGCAC
GATGATTCAA CGAGCACAGC GGTTGTGGAA AACGGTGAAG CAACTTTCAC GTTCGTTCCA
TATGAAGTCA GAGACTATAA ACTGGAACTG TCCTTCAAGA AGGCAAAGAC ACATGTTTAC
GTGTATGCCT ACCATGGTGC AAGAACGAGC AATGAGTTTG TGATCGTCGC AGAAAGCGAC
ACGGTGAAAC CTGGTGATAG AATACCGGTT CGTCTCCTTG CCCCTGGTAA TGTGAAGGGT
GTTCTGGGAA TTACTTCGAA GAGGATCTAC AAAACGATTC CCGTTATCTT CACAGGTTCC
ACCGAATTTC TCGTTGAAAT CCCTGAAAAT ATCCTGGAAA AGAACATTTT CTTTGTTTTT
ACTGGATTCG ACGAAAAAGG CGAAATCTAT CTGACGAAAA AACTGGATGT TTCTTTGAAT
ACCAATTTCA CCGACATGGA GATAAAGTTC GACAAAGACC AGTACGAACC AGGAGAAATC
GCACAGATCA CCATAAAATC CAGTGTGGAT GAGATCTGCA TCTCGGTGGT CGATGAGGCG
ATATACGATC TTGTGGGGAC AGAGCCACCT GTTCTCGAAG AATTTCTGTA TCCTTCCATG
AATTATCCAC TGGTGAGAGG AAACTTCGCG TCCGGATGGA TACTTTACGT TTCGAGGAAT
TCGATCCGAA ACAAACTTGC TTCGTTGCCC GAAGAGAAAA CCTTTGCCGA TTTCAAACAG
AATGCTTTCC CCAGTAGGGT GAATGTCAGA GAATACTTTC CTGACACAGT CCTGTGGATA
CCTGATGTGA AACTCCACGA CGGTACGGCG AGGATAAGTT TCAAGGTGCC AGACAGCATA
ACCTCGTTCA GAGCAACTGC CTATGGTTTT TCAAAGGACA GATTTTCTCA AGGAGAAGAA
ACCATCGTTG TTTCTAAGGA TTTCTACATA ACACCACATC TTCCCTCCTT CCTGAGGGAA
GGAGACATCA TGAGACTATC TGCAACTGTT TTCAACAGAA CGGGGAAGGA GCTTTTCGTC
GAGATCAGAA TAGAGCTGCC TGATAACATA AAACTCGTTG AAGGAAACTC GTCGAGACAT
TTCTTGATGG AGGCGAACTC ATCTCACACT GAGACCTGGA CCGTGAAGGC GATTTCTCCT
TCCGAGGAAA GTTTCGTGCA ATTCTTTGCA AGCGGAGGCG ATCTGAGTGA TGCGATTTCA
CTGAAAGTTC CTGTCAGAAG GTTCGCTTTT GAGAGGGAAT TTTATAGGAT TATGTTCATA
GACGGAGAAG AAACAGTGAC GCTTCCAGAA GGGCCGTTTG TTTTCTCGAA GATAAGGTTT
TTGAGCGGCA TAACACCACT CATCGAGGAT AGTTTGAGGG AACTCATAGG ATTTCCGTAC
GGATGTGTTG AGCAGACCAT GAGTCGGTTC TTCCCTGCGG TGGTTGCGGC CAACCTGGGG
TTGAAGGTGG AAGATCTGGA TGAAATCATA CGAAAAGGAT TGTTCAGAAT ATATTACTAT
CAGCATGCTG ACGGTGGATG GGGATGGTTT GTTACAGACA AAACCAACAA TTTCATGACA
TGCTATGTTA TGGAAGGGTT GTATTTCACA ATGAAAGCAG GTTATAATGT GGCAGAAAGT
GTTTTGGAGA GAGGAATAGA GTACCTCAAA GCCCATCCAT CGGCTTACGG TTCCTACGTT
TTGGATCTGT ACGACATCGA GCACGAACCG TTCGAACCCC AGACCCCCGC AGATCTGGTT
TTCCTGAGTA TGGAGTCAAA AGAAGCGTTG ACGAAGGTGC TGAAGTACGT AGTCCAGGAC
GATCAAAAGG CCTATCTGAA GGTGACTTCT GAAGACCCCC TCATCAGTGA GATACAACTC
AACAGTGTCC TGCTCAAAGC CCTTGTGAAA TGGAAAGAGT TCCCTGAACT CCAGAAAAAA
CTGGTTAACT ACCTTCTTTT GAAGAAAGAG GGATACTTCT GGACTTCCAC GAAGGACACC
TCTTTTGCGA TCCTTGCACT CCTTGAAGCG ATGCCAGTGT ACGAATCTAC CTCTTTGAGG
GTTTTAAACT CTGGAAAAGA GTTCGTACTG AGATCAGGAG AGGAGAGCCA ACTTGTCCCT
GGACCTCTGA TTGTCTCGGG CAATGGTGTG GTGGAGGTGC ACGTTGTACA TCCAGTTGTA
CCGAAAGAGT CTGTGAGTGA GGGCATGGAG ATAAAAAGAA AGTTTTACAA GAGGTATGAG
CTTTTCATAG AAGAGATAAG AAGCCTCGTG GATGCCTTCG TGCCGCTTGG AAGAGGCTAT
GTACCGCATT CGATACACAG GGTTGAGGAA GAAAAGGACG ATGAACTCTT CATCTTACCT
TATGAACTCC GGAATGAAAC TGTCGAGTAT GGAGGAATCA CCATGAAAGT GAATGGTAAC
AGAGTCGAGA TAAAAGGAGA GACGTACTCG TTTTCCAGGA TAAAGACACA AAACGGTTTG
ATTCTCATAG TTCTTGGAAA TGAAGCTCTC GTCTATGATC CGGGAAAAAA CACAGTCACA
AGGTATCTGG AGGTTCTGGA CGGAGATTTC GTTGGAGACA GGGGGGAGAC AGATTCTACT
ATGTGGCTGC AGAAGGGTAC GACCTGGAAA AATTATCGGA TGTGTCTTTT TCGGAAGAAG
AAATCAGAGA ATGGACAAAA GGAGAATGTT GTTCCATAA
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| Protein sequence | MRSLFFSFMV FMAAFLFGGY AYFSGDPILR VGEGISFVVS DMENVVLNVW KVEDEETFLK
AVLTEENFDF WWQENNPLVY RKTFSSRNEW KEFSVPLKEK GFYFATLTTP LAGTSVITRE
LDRGLFIVTD LEVIYFSDGS RTMLHVFDID DGFAEKAEVF LYRDSILVGR LFTDEYGTVE
VNDRFDTVYV RYKDSRFIGN VYSPRRFVED EKLFLITDRP IYKPSDTVYF RGQLFKVDGN
VYRAFESTGV TVTVFDTKEN EIYRSTFETS ALGGFSGDLK LPDTAPVGLY RIKIEHGENT
FWENFLVEEY RKPEYRVNIE TDRETYISGE VINYRIRVKY FNDQPVEKAE VAYYVHAFPE
DENGYLVYRG TGFTNEKGVL EFGVKTQEGF QGVYALEVIV VDVSQRQIEE KKTVKVYADD
VLISPQDRFV YTSPGNQVRM TVKVTDLSGN PLEGVLYVLH DDSTSTAVVE NGEATFTFVP
YEVRDYKLEL SFKKAKTHVY VYAYHGARTS NEFVIVAESD TVKPGDRIPV RLLAPGNVKG
VLGITSKRIY KTIPVIFTGS TEFLVEIPEN ILEKNIFFVF TGFDEKGEIY LTKKLDVSLN
TNFTDMEIKF DKDQYEPGEI AQITIKSSVD EICISVVDEA IYDLVGTEPP VLEEFLYPSM
NYPLVRGNFA SGWILYVSRN SIRNKLASLP EEKTFADFKQ NAFPSRVNVR EYFPDTVLWI
PDVKLHDGTA RISFKVPDSI TSFRATAYGF SKDRFSQGEE TIVVSKDFYI TPHLPSFLRE
GDIMRLSATV FNRTGKELFV EIRIELPDNI KLVEGNSSRH FLMEANSSHT ETWTVKAISP
SEESFVQFFA SGGDLSDAIS LKVPVRRFAF EREFYRIMFI DGEETVTLPE GPFVFSKIRF
LSGITPLIED SLRELIGFPY GCVEQTMSRF FPAVVAANLG LKVEDLDEII RKGLFRIYYY
QHADGGWGWF VTDKTNNFMT CYVMEGLYFT MKAGYNVAES VLERGIEYLK AHPSAYGSYV
LDLYDIEHEP FEPQTPADLV FLSMESKEAL TKVLKYVVQD DQKAYLKVTS EDPLISEIQL
NSVLLKALVK WKEFPELQKK LVNYLLLKKE GYFWTSTKDT SFAILALLEA MPVYESTSLR
VLNSGKEFVL RSGEESQLVP GPLIVSGNGV VEVHVVHPVV PKESVSEGME IKRKFYKRYE
LFIEEIRSLV DAFVPLGRGY VPHSIHRVEE EKDDELFILP YELRNETVEY GGITMKVNGN
RVEIKGETYS FSRIKTQNGL ILIVLGNEAL VYDPGKNTVT RYLEVLDGDF VGDRGETDST
MWLQKGTTWK NYRMCLFRKK KSENGQKENV VP
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