| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1777 |
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| Symbol | |
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| ID | 5170406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1782987 |
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| End bp | 1784285 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640564298 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001245353 |
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| Protein GI | 148270893 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2461] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00046622 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGAAAG AAAAGGTGGA AATCTTCAAG GACATACTCA AAAGGCTTCA CAAAGGAGAG
GATATAGAAT CTTTGAAGAA ACAGTTTGGT GAGTTGCTTT CCAGGTTGTC ACCTTTTGAA
ATTCCCGTTA TAGAACAGGA ACTTCTCAGA GAAGGTGAAA TCGATGTGAA AGACATCATC
AAGATGTGCG ATCTTCATGT TGAGTTCTTC AGAGGAGCCG TTTCAGAGGC TGGCAGAGAA
ATAGAAAACC TCCCAGAGGG TCACCCTCTG AGGACTCTTT ATGAGGAGAA CAAACAGATA
CTCAAAGACG CAGAGGCTCT GGGTTTGCTG GCTTCTAGCA CGTTTTCCCT CCAGAATGAA
GATCCCCGAA GAAGAAACTT CTACGAAAAA CTCGTCCAGC ACGTGTCTGA ACTTTCCAGA
ATAGGATACA CGCACTACAC AAGAGAAGAG ATGCTTATAT TCCCATACAT CGAAAGAAGG
GGAATCACCG CAGTTCCCAC CGTTCTTTGG TCAAAGCACG ATGAGGTGAG ATTGAAAATA
AAACTCCTGG TCAACCTCCT GAAAAAAGAA GAGGACGATG AACGACTGAA AAAAGAAGCC
CTCGAACTCT CAAGGATGCT CTCAGATATG GTCTTCAGAG AAAACAATAT TCTCTATCCG
ACTCTGAAGG TTCTTCTCTC CGAAGGTGAA TGGAAGGCCA TAAAGATGTT TGAAAAGGAC
ATAGGATACT ACAAGGTGGA AGTGGTGGAA GAATGGGAAA CTTCTGCAGA ACCGCTCCTC
CCACACCAGA TAGATCCAAC CGTTCCTCCC GAAACGTACG AAAAGCTCCC AGAAGAGATC
AAAAGGGTTG TAGGAGCACT CAGACCTGAC ACTGAGTATT CACTTGTTCG AGAAAATGAT
CTGAAACTGG AAAGCGGATA CCTTTCCATG GAGGAGTTGA ACGCAATTTT CAAGACACTG
CCAATCGATG TCACCTTTGT GGACAAACAT GACAGAGTTC GGTTCTTCTC AGGAGGCCAC
AGAATATTCC ACAGGGCACC CACTGTCCTC GGAAGACCGG TGCAGTTCTG TCACCCACCA
AGGAGCGTTC ATATCGTGAA CAAGATTCTA AAAGCCTTCA AAGAAGGAAG AAAAAACCCT
GCAGAGTTCT GGATCAACAT GGGAGAAAGA AAAATCCACA TAAGATACTT CCCGGTTCTG
GACGAGGACG GAAACTACAT GGGCACACTC GAAGTAGTTC AGGACATCAC CGACATAAAA
AAACTCGAGG GAGAAAAAAG GCTCCTGGAC TGGAAATAA
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| Protein sequence | MEKEKVEIFK DILKRLHKGE DIESLKKQFG ELLSRLSPFE IPVIEQELLR EGEIDVKDII
KMCDLHVEFF RGAVSEAGRE IENLPEGHPL RTLYEENKQI LKDAEALGLL ASSTFSLQNE
DPRRRNFYEK LVQHVSELSR IGYTHYTREE MLIFPYIERR GITAVPTVLW SKHDEVRLKI
KLLVNLLKKE EDDERLKKEA LELSRMLSDM VFRENNILYP TLKVLLSEGE WKAIKMFEKD
IGYYKVEVVE EWETSAEPLL PHQIDPTVPP ETYEKLPEEI KRVVGALRPD TEYSLVREND
LKLESGYLSM EELNAIFKTL PIDVTFVDKH DRVRFFSGGH RIFHRAPTVL GRPVQFCHPP
RSVHIVNKIL KAFKEGRKNP AEFWINMGER KIHIRYFPVL DEDGNYMGTL EVVQDITDIK
KLEGEKRLLD WK
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