Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1726 |
Symbol | |
ID | 5170199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 1721540 |
End bp | 1722805 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640564252 |
Product | major facilitator transporter |
Protein accession | YP_001245307 |
Protein GI | 148270847 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGTGA TATTCATTCT GATTCTCATG GTCCTCCTGA ACGCGGATCA GATGGTGATG TCTCCGAACA TAGGAGCGAT AGAACAGGAG TTCAACATCA CTGATGCTCA GATAGGTCTC GTTGCGTCGT CTTTCACGGT GATAGGGGCT CTTGTGAGCC TTGTGTGGGG GTACCTTGCC GACAGATACA GCAGGAAGAA CCTTCTCATC TACTCCATTC TCGTTGGTGA GATTCCCTGT CTCATGAGTG CGTTTTCTCA CTCCTACGGA GAACTCTTTT TCTGGAGAGC CCTCACCGGA ATAGGTGTGG GAGCGTCCTT TCCCATTGTT TACTCGATGA TAGGAGACAT GTTCGACGAG GTAAAGAGAG GAAAGGTCGT GGCTCTTATA TCTTCTGCGA TCTCCATAGG AAGCGTTCTT GGGATGATCG TTGGGGGTTT TTTGGGACCG AAATACGGTT GGAGAGTTCC CTTCATCGTG GTTTCTGTTC CAAACATCGC CCTTGCGATT TTATCCATCT TCGTTCTGAA AGAACCGAAA AGAGGTGCCT TTGAAAAAGG CATCGGTGAA CTCGTTCAAT CCGGGTACGA GTATCCGAAA GCGCCGAAAC TCTCTGATTA CGCAAAACTT GTGAAGGTGA AAACGAATCT TCTTTTGTTC TTTCAGGGTA TAGCAGGGAC TATTCCCTGG GGTGCCATTC CTTACTTTCT TGTGGAATTC TTCAGAAGAG AAAGAGGTCT TTCGGTGGAG ACGGCTACCC TTGTTTTCCT CGTGTTCGGT CTTGGAAACA TCGCTGGAAT CATCCTCGGA GGACTGTGGG GAGCGAGCAT CTACGCGAAA TCCAGGCCAT TTCTACCGCT GTTTTGCTCG ATCACAACCG CTCTTGGAAC TTTCTTCACC GTTATGACCC TGGACTACGT GGGAAGTCTT CTCGTTCTCA TGTTACTTGG TTTCGTCGCT TCTTTCACCG CGAGTCTCAC GGGTCCGAAC GTGAAGTTCA TGCTTCTGAA CGTCAACGAA CCACAGGAAA GAGGAAGGAT ATTCTCCATA TTCAACCTCA CCGATTCGCT CGGAACGGGA TTTGGAAAAT TCGCGGGAGG AGTGATGTCC GTTGCCCTCG GATCTCTCGG AGCTGCCTTG AAAGTCTCCG CTTATTTCTG GCTTATCTGT GCGGTGCTGC TCTTTGTTCT GGTTTTTTAC TTCACAAGGG ACGTGGAAAG ACTTCAGAAA AGCATGATGA AGCTGGCCAA AGATATTTCT TCTTGA
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Protein sequence | MAVIFILILM VLLNADQMVM SPNIGAIEQE FNITDAQIGL VASSFTVIGA LVSLVWGYLA DRYSRKNLLI YSILVGEIPC LMSAFSHSYG ELFFWRALTG IGVGASFPIV YSMIGDMFDE VKRGKVVALI SSAISIGSVL GMIVGGFLGP KYGWRVPFIV VSVPNIALAI LSIFVLKEPK RGAFEKGIGE LVQSGYEYPK APKLSDYAKL VKVKTNLLLF FQGIAGTIPW GAIPYFLVEF FRRERGLSVE TATLVFLVFG LGNIAGIILG GLWGASIYAK SRPFLPLFCS ITTALGTFFT VMTLDYVGSL LVLMLLGFVA SFTASLTGPN VKFMLLNVNE PQERGRIFSI FNLTDSLGTG FGKFAGGVMS VALGSLGAAL KVSAYFWLIC AVLLFVLVFY FTRDVERLQK SMMKLAKDIS S
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