| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1691 |
|---|
| Symbol | |
|---|
| ID | 5170452 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 1693028 |
|---|
| End bp | 1694365 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640564217 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001245272 |
|---|
| Protein GI | 148270812 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000499428 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTGGATC CAAAAATAAA AAGAGCGCTG AACATATCCA TCATAGAAGG AGCACTGGCC
GTACTCATCA ACCAGTTCTT CGGTGGAGCT TATCTGACGG GCTATTTCCT GTGGATGGGA
GCCTCAAGCT TCTTCATCGG CCTTTTCGGT TCTATTCCCT TCTTGGCAAA CACGCTCCAA
CTTCTCACAC TCTCATTCTC ACATCGTTTG AAATCCAGGA AACAGATCAT CGTTCCACTG
ATGTGGACTG CCAGAACGTC CATATTGCTG TTCGCCGTAT TTCCCGCTAT CAGGCATGGC
CTTCTCTTTG CGTATCTTCT TTATTTTTAC ATCCAGATCG CTGGTGCCCT GTCTGCTCCT
CTCTGGCAGA GCTGGATGTC TGATTTGGTA CCAAAAGATA TGATTGGAAG CTACTTTGGT
TTCAGAAATC TCATTCATGG AGCGGTTCAG ATTCCCGCTA TGTTCCTTGC AGGCGCGATA
CTCGATTCTC TTGGAGAAAA CTGGAAAGGT TTTGGCACAC TCTTTCTCAT AGCGGGTTCT
CTCGGGGCAC TGAACGGATA CTTCTTGAAG ATACAGTACG AGCCACCGTA CAAACCACGC
GAGGCGTCTG TTTCCATAAC AAAAGCCGTG AAGTTTCTCC TGAAAGAAGA ACACTTCAAA
AACTTTCTTC TTGGATTCGC CTTCTGGCAA TTTGCCATAG GTGTTGGTAC GGTCTATATA
AACGTGATGC TTTTAAAAGA GGTCGAGTTT TCCTATCTTC AAATAAGTGT TCTGAACGCA
GTGGGAATGT TCATAGGAAC TCTCTTCCAA CCTTTCTGGG GAAAGTTGGG AGACAGGTAT
GGATTTCAAT ACTTTCTCAA AGTCTGTCTG TGGATTCATG CGATTGTTAT TCTCCTCTGG
GCACTGACTC CTAGATCGTT CCTTTACGTC TTCTTCCTCC AGATAATAAT TGGTATATTC
GTAACAGCAG GAACAAGCCA GCTTGTTTTC TACACCCTCA TGTACACAGC ACCTTCATCC
CTCAAAACTG AAGCCTTCTC TGTGTTCAAC AGCCTATCCA ATCTTTCTTT ATTCGCCGGC
TCTTTAGTTG CAAGCGTTTT AGTTGCCTCA CTGGAAAACA TCAATCTTCC CTTTGGGATA
TCCGCCATCA GACTCACCAT GTTTGTATCG TTCTTTTTGA GAGCATTGGC AGCGTACATA
ATGTCCAGAA TGGATCTTGG AACACCACAG AAAGTGGACT CTCTGATCCA GGCGGTTAAA
GAGTCATTCT TCTCAGAAAC AGTTCCGTGG ATCAGAGAAA GGTTGAACAC ACTGAACATT
TTTAGAAGAA AGCGTTGA
|
|---|
| Protein sequence | MLDPKIKRAL NISIIEGALA VLINQFFGGA YLTGYFLWMG ASSFFIGLFG SIPFLANTLQ
LLTLSFSHRL KSRKQIIVPL MWTARTSILL FAVFPAIRHG LLFAYLLYFY IQIAGALSAP
LWQSWMSDLV PKDMIGSYFG FRNLIHGAVQ IPAMFLAGAI LDSLGENWKG FGTLFLIAGS
LGALNGYFLK IQYEPPYKPR EASVSITKAV KFLLKEEHFK NFLLGFAFWQ FAIGVGTVYI
NVMLLKEVEF SYLQISVLNA VGMFIGTLFQ PFWGKLGDRY GFQYFLKVCL WIHAIVILLW
ALTPRSFLYV FFLQIIIGIF VTAGTSQLVF YTLMYTAPSS LKTEAFSVFN SLSNLSLFAG
SLVASVLVAS LENINLPFGI SAIRLTMFVS FFLRALAAYI MSRMDLGTPQ KVDSLIQAVK
ESFFSETVPW IRERLNTLNI FRRKR
|
|---|
| |