| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1679 |
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| Symbol | |
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| ID | 5170106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1676917 |
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| End bp | 1678197 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640564205 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001245260 |
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| Protein GI | 148270800 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000895921 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCTCTA GGTTGATGGT CCTGGGATTT TTACTACTTT TGTTCGCTGG CATTCTTCTA
GGAGTGAAAC TTACGATCTT CAGTGCCGGT GCCAGTGAGG GTCAGGCACT GGATGCGGCA
ATCGCTGAGT ACAAAAAACT ACATCCAGAG GTGGAATTCG AGCACGTCAA TATCACATCT
GGTTGGCAGG AGAAGTTCTC CCTTGCGTTG ATGAGTGGTG ATGCTCCCGA TCTAATAGCG
ATCACTGTTC CATACGCGGA TTATTTCAGA TCTTACCTTA TTGATCTCGC ACCTTATGTA
GAGAAACACC TAGGCATTTC TCTCAAAGAG TACAAAGATT CCATGTACGA TGTGGTCAGA
GCCTATGTGG GGAAAACGGA GGATGAGTTA ACTTACGTTC CCCTCTATCT CACTGTCCAC
AGTCTTTGGG TGAACGTTGA TTATTTTGAG AAAGCGGGTA TTCCTTATCC TCCACTTGGA
GGAAGGGATG AACCCTGGAC ATGGGAAGAG TTCGTAGATG TTCTCAGAAC AGTCAAAAAA
GTCAACAAAC TACCAGCTGC CATGTCATTT TCCTATTCCA CGGAGAGATT ATTCAATTAC
CTTGCCGTGA GGGGAGTTAA AGTTCTGGAC GAGAACCTGG ATCTTGTTCT CGATAAGGAT
CCCAGAGCAA AAAAGGTGCT GCAAGATTTT GTAGATCTTT TCAAAGAAGA ACTAGTGCCG
GCACCGGAGT GGATAGCACA GCAGTCCGAT ATAAACGATT TCCTGGGGGG TATCACGGCG
GTTCACTGGT CCGGTAGCTG GATGTGCAGA TCCATCATCG ACATCATGAA ACAGACAGGA
AAACGTTTTG CTCCGGCTTA CGTTCCAAAA GATGTCGACT GGTTTGGCAT CAACGGAGGC
CATATCTTCG GGGTGGTAAG AACAGGCGAC AAGAAGCGAG AGGAAGAAGC TATAAAATTC
GCTCTCTGGA TAGGACAGAA GGGACTTGGA AACGATGTGT TCAACAAGGC GCTTCTCGGA
ATTTCACCGT TCAAAGGCCA TGAAATAGAT TACGGTGTAC CGGAGATGAA CGAATGGATA
CCGGTCTTTC AGACTTTGAT CGAAAGGGCA CCTTCTTGGA TAGTTCCGGT CAGAACCTGC
GAACTCTGGG CAAGACTCTA CGATCCTTTG AGAACACAGA TCGCCATGGT AATAGGTGAC
CAGCAGAATC TTGATGATGC ATTGAAAAAC ATCCGAAAAG AGTACGAAAC CATCCTAGAA
GAACTTGGAG GAAAGAGATA A
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| Protein sequence | MRSRLMVLGF LLLLFAGILL GVKLTIFSAG ASEGQALDAA IAEYKKLHPE VEFEHVNITS
GWQEKFSLAL MSGDAPDLIA ITVPYADYFR SYLIDLAPYV EKHLGISLKE YKDSMYDVVR
AYVGKTEDEL TYVPLYLTVH SLWVNVDYFE KAGIPYPPLG GRDEPWTWEE FVDVLRTVKK
VNKLPAAMSF SYSTERLFNY LAVRGVKVLD ENLDLVLDKD PRAKKVLQDF VDLFKEELVP
APEWIAQQSD INDFLGGITA VHWSGSWMCR SIIDIMKQTG KRFAPAYVPK DVDWFGINGG
HIFGVVRTGD KKREEEAIKF ALWIGQKGLG NDVFNKALLG ISPFKGHEID YGVPEMNEWI
PVFQTLIERA PSWIVPVRTC ELWARLYDPL RTQIAMVIGD QQNLDDALKN IRKEYETILE
ELGGKR
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