| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1660 |
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| Symbol | |
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| ID | 5171391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1656081 |
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| End bp | 1658495 |
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| Gene Length | 2415 bp |
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| Protein Length | 804 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640564186 |
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| Product | DNA gyrase, A subunit |
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| Protein accession | YP_001245241 |
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| Protein GI | 148270781 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00811487 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGAGA TCCTGATAAA CAAACCCGTA GAGGATGAAC TTGTTGAGTC TTATCTTCTG
TACTCGATGA GCGTTATAGT GGGAAGGGCC ATTCCGGACG TTCGGGATGG CCTCAAACCC
GTTCAGAGGA GAATTCTCTA TGGAATGTAC GAACTCGGTC TCAAACACAA CTCACCCACC
AAGAAGAGTG CGAGAATCGT CGGTGAAGTG ATGGGTAAGT ACCATCCTCA CGGTGACGCA
CCCGTGTACG ATGCCCTCGT GAGGATGGCT CAACCGTTCA CGATGAGATA TCCACTCATC
GAGGGTCAGG GAAACTTCGG TTCCATAGAC AGAGACCCTC CAGCTGCGAT GAGGTACACG
GAAGCGAGAC TCACGAAGCT TGCCGAAGAA ATGCTCGAAG ACATAGAAAA GAACACGGTG
AACATGGTCG ACAATTTCGA CGGCACGTTG AAGGAGCCGG AAGTCCTCCC ATCCAAGGTG
CCAAATCTCA TAATAAACGG TGCCTCCGGT ATAGCGGTGG GAATGGCCAC AAACATACCT
CCACACAATC TCTCCGAGAC CGTGGATGCC CTGATTTATT TGATCGATCA TCCAGAAGCC
ACGGTTGAAG AACTCATGCA GTTCATAAAA GGACCGGATT TTCCCACAGG AGCCGTGGTA
GTGAACGCTT CTGAATTGAA GAAGGTTTAC GAAGAGGGAA GAGGCAGGAT CATCGTCAGA
GGAAAGGTGC ACGTCGAGGA TGGAAAGAGA GTAAAGCGAG TCGTCATCAC GGAGATTCCG
TACGGAGTCA GTAAAGCGGG TCTCATAGAA CAAATAGCAA AAATAGCGAA AGACGACGAA
TCACTCCCAA TCAGGAACAT AAGAGACGAA TCCGATAAAC GCGGAATGAG GATAGTTATA
GAGATCCCGA AGGACACCAG CGAAGAGGTC ATAATAAACA ATCTCTACAA GAGAACTGCT
CTTCAGGATT ACTTCAACGT TCAAATGCTG GTCATAGACA AACACAAAAG ACCCAGGTTG
ATGAATTTGA AAGGATTGAT GGAGGCCTTC CTCGAGCACC GCTTTGAAGT CATCAGAAGA
AGGGCAAGGT ACGAATACGA ACAGTACACA AGGAGGGCAC ACGTTGTTGA AGGTCTCTTG
AAGGCGGCAA GAGCGATAGG TGTTGTTGTG GACATCGTGA GGAACAGCAA GGATGTGGAA
AGTGCGAAGC AATCACTCAT GGAAACACTC GAAATCACCG AAGAACAGGC AAAAGCCATT
CTCGACATGA GACTTTCGAG GCTGACTTCC CTCGAAATAG AGAACCTTCA AAACGAATAC
TCCGATCTGG TCAGGAAGAT CTCAGAAGTG AAGGAAATAC TCGAGAAGGA CGAAAAAGTA
AAGGAGATAA TGAAAGAAGA ATTCCTCTAC TTGAAGCAAC AATACGGGGA TCCCAGAAGA
ACAGAAATAA CAGATCAAAG TATCCAGTAC AACGAAGAGG AACTCATTGT CGAAGAAGAC
GTGGTGATAA CATTGAGTCA TAACGGCTAT TTAAAGAGCA CACCGCTGAA CAGCTACAGA
TCGCAGAAGC GTGGGGGTAA AGGAATCACC GTCTCGAAAC TCACTGAAGA TGACGAGGTC
GAGTTCGTTG TGGTCGCGAA AAACACCGCA TCGACCCTGT TTATAACGAA CCTCGGACGG
GCGTATGTTC TCAAGAATTA TCAGCTGGAA ACCACCGGTA GAAACACGAG AGGAAGACAC
ATCACCGCGT TTCTGAATCT CGAAGACACA GAAAAGATCG TGGCACTCGC TTCTCTGAAC
GGTGATGGCA ATGATCTTGT GATCGTTACA AAATCTGGGA AGATCAAAAG AACCGCTCTC
AAAGAGTTTG AAAACGCCAC CAGCAATCGC GGTGTCAGAG CCATAAAGAT AGAACCTGGA
GATGAGATCG TCAGCGCCAG GGTTGTTAAC AGCGAAAAAG AAACACTCAT AGTGGCAACG
AAGATGGGTA TGGCCATCAG ATTTCCGGTG AGTGATGTTC GCAGAATGGG AAGAAATGCG
GCCGGAGTTC AGGCGATAAA GCTTCAGCCA GGAGACGAAG TGGTGAGTGT GGACGTGATA
CCTCCAGGTG AGGAAGGAGA GATTCTCACC GTGACAGAGA AGGGATTCGG CAAGAGAACA
CCCGTTCAGC TGTACAGGAT TCAAAGAAGG GGAGGAACGG GTCTCAGAAA CATCTCCGAT
GTGAACAAAA CGGGATACGT AGTAGCTGTG AGATACGTGA GGGGCGACGA AGAGATAGTG
GTGGTCACAA GAAACGGCAT GATGATCAGA TTTCCCGTGT CTGAAATCGG TGTCATCGGT
CGTGTAACGA AAGGTGTGAA ACTCATCGAA CTTGGAGACG ATACCATATC GAAGGTGGCG
GTGGTGAAAG ATTGA
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| Protein sequence | MPEILINKPV EDELVESYLL YSMSVIVGRA IPDVRDGLKP VQRRILYGMY ELGLKHNSPT
KKSARIVGEV MGKYHPHGDA PVYDALVRMA QPFTMRYPLI EGQGNFGSID RDPPAAMRYT
EARLTKLAEE MLEDIEKNTV NMVDNFDGTL KEPEVLPSKV PNLIINGASG IAVGMATNIP
PHNLSETVDA LIYLIDHPEA TVEELMQFIK GPDFPTGAVV VNASELKKVY EEGRGRIIVR
GKVHVEDGKR VKRVVITEIP YGVSKAGLIE QIAKIAKDDE SLPIRNIRDE SDKRGMRIVI
EIPKDTSEEV IINNLYKRTA LQDYFNVQML VIDKHKRPRL MNLKGLMEAF LEHRFEVIRR
RARYEYEQYT RRAHVVEGLL KAARAIGVVV DIVRNSKDVE SAKQSLMETL EITEEQAKAI
LDMRLSRLTS LEIENLQNEY SDLVRKISEV KEILEKDEKV KEIMKEEFLY LKQQYGDPRR
TEITDQSIQY NEEELIVEED VVITLSHNGY LKSTPLNSYR SQKRGGKGIT VSKLTEDDEV
EFVVVAKNTA STLFITNLGR AYVLKNYQLE TTGRNTRGRH ITAFLNLEDT EKIVALASLN
GDGNDLVIVT KSGKIKRTAL KEFENATSNR GVRAIKIEPG DEIVSARVVN SEKETLIVAT
KMGMAIRFPV SDVRRMGRNA AGVQAIKLQP GDEVVSVDVI PPGEEGEILT VTEKGFGKRT
PVQLYRIQRR GGTGLRNISD VNKTGYVVAV RYVRGDEEIV VVTRNGMMIR FPVSEIGVIG
RVTKGVKLIE LGDDTISKVA VVKD
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