Gene Tpet_1655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1655 
Symbol 
ID5170516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand- 
Start bp1651492 
End bp1652148 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content46% 
IMG OID640564181 
ProductTrkA domain-containing protein 
Protein accessionYP_001245236 
Protein GI148270776 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.00000867889 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAGTCA TAATAATCGG TGGAGAAATG ACAGCGTATT ACCTTGCGCG CTCCATGCTG 
TTGCGAAAGT ACGGCGTGGT GATCATAAAC AAAGACAGAG AACTCTGCGA AGAGTTCGCC 
AAGAAATTGA AGGCGACGAT CATACACGGA GATGGTAGTT ATAAAGAGGT CCTCAGAGAC 
GCTGAGATTT CAAAAAACGA TGTGGTGGTG ATTCTAACTC CGAGGGATGA GGTTAATCTC 
TTCATCGCAC AACTCGTGAT GAAAGACTTC GGGGTAAAAC GAGTGGTGAG CCTTGTTAAC 
GATCCGGGAA ACATGGAAAT ATTCAAGAGA ATGGGTATCA CAACCGTTTT GAATCTCACC 
ACCCTCATAA CGAACACGGT GGAGGCTCTC ATCTTTCCGG ATGAATTTTC CAGTATCATA 
CCGCTGGAAC AAGGTATCGA GTTCATGAGT GTGAACGTGG AAGAAGACAG TCCGGTTGTG 
GGAAAGAAGT TGAAAGATCT TCCGCTTCCA AGGGATAGTA TCGTTGCTGC TATCGTTCGC 
GGTGGAGTGT TCGTGGTTCC GAGAGGAGAT ACGGAAATCC TCTCTGGTGA TAAATTGTAC 
GTGATCGCGA GTGCAGAAGC CAAAGAAATA GTGGAAGAAA CGCTGCTTGG AAGGTGA
 
Protein sequence
MKVIIIGGEM TAYYLARSML LRKYGVVIIN KDRELCEEFA KKLKATIIHG DGSYKEVLRD 
AEISKNDVVV ILTPRDEVNL FIAQLVMKDF GVKRVVSLVN DPGNMEIFKR MGITTVLNLT 
TLITNTVEAL IFPDEFSSII PLEQGIEFMS VNVEEDSPVV GKKLKDLPLP RDSIVAAIVR 
GGVFVVPRGD TEILSGDKLY VIASAEAKEI VEETLLGR