| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1580 |
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| Symbol | |
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| ID | 5170048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1579910 |
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| End bp | 1580623 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640564106 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001245162 |
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| Protein GI | 148270702 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAACTGG GCATCAGGGA TAAGGGAGCA CTCGTTCTTG CGGCGAGCAG GGGTATTGGA
AGAGCTGTAG CGGATGTTTT GAGCCAGGAA GGAGCGGAAG TTACCATCTG TGCGAGAAAT
GAAGAACTTT TGAAGAGAAG CGGCCACAGA TACGTCGTCT GCGATCTCAG GAAGGATCTG
GATCTACTGT TCGAAAAGGT GAAAGAGGTG GACATCCTCG TTCTGAACGC AGGAGGACCA
AAAGCGGGAT TCTTCGATGA ACTTACGAAT GAAGATTTCA AAGAAGCGAT CGACAGCCTC
TTTTTGAACA TGATCAAAAT TGTGAGAAAC TATCTTCCAG CGATGAAAGA AAAGGGCTGG
GGAAGGATCG TAGCCATCAC TTCTTTCTCC GTGATCTCAC CGATAGAAAA TCTCTACACA
TCCAATTCTG CGAGGATGGC CCTCACCGGA TTTCTAAAGA CACTCTCTTT TGAGGTGGCA
CCGTACGGTA TCACAGTGAA CTGTGTGGCA CCGGGCTGGA CGGAGACAGA GAGGGTGAAA
GAGCTTCTCA GTGAAGAAAA GAAAAAACAG GTGGAATCTC AGATCCCCAT GAGAAGGATG
GCAAAACCCG AAGAGATAGC CAGTGTTGTG GCATTTCTCT GTTCCGAAAA GGCCTCTTAT
CTAACTGGAC AAACCATTGT TGTGGATGGT GGGCTTTCCA AATTTCCGCT CTAA
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| Protein sequence | MELGIRDKGA LVLAASRGIG RAVADVLSQE GAEVTICARN EELLKRSGHR YVVCDLRKDL
DLLFEKVKEV DILVLNAGGP KAGFFDELTN EDFKEAIDSL FLNMIKIVRN YLPAMKEKGW
GRIVAITSFS VISPIENLYT SNSARMALTG FLKTLSFEVA PYGITVNCVA PGWTETERVK
ELLSEEKKKQ VESQIPMRRM AKPEEIASVV AFLCSEKASY LTGQTIVVDG GLSKFPL
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