| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1550 |
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| Symbol | |
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| ID | 5170494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1541897 |
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| End bp | 1542883 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640564077 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001245134 |
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| Protein GI | 148270674 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000390905 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCCTCTA TCAAAGATGT AGCAAGGCTC GCTGGTGTTT CTATAGCAAC TGTTTCGCGC
GTGATAAATG GTTATGATAA CGTCTCGGAA GAGACGAGAA AGAGAGTAAT CGACGCCATC
AGAAAGCTCA ACTATCACCC TGTGTACGCT GTGAAGGGGG CTGTTTTAAA GAGAACTATA
GGAGTTCTCG TCCCCAACTT TGGGGGCTTT CACTACAACG AGATATTGAC GGGCATAGAA
AAAGAAGCGA TAAAGAGAGA CTTCACCCTC ATGATTTCAA CAACACTTCA CAGGACCTCT
GTGGAGCTGG AAAGACTGGA GGTTTTCTTT GCGAAAAGAG TGGATGGTAT CATAGTCTGC
TCGTCGAAGA AGGACGAGGA ACAACTCGAA AGATTGATAA AGAGTGCCAT TCCAGTTGTT
GTGGTGGACA GGGAAGAACC GGAGATCAGG CTCGACAACG TTGGCATCGA CAACTACGCC
GCTGGAAGGA TGTGTGCGAA GTACCTTCTG GAAAAGGGGC ACAGAAAGGT TCTCCTTTTG
AAGGGTAGAA AAGACATTTA TTCTTTTTCC GACAGAGAAA GAGGTTTCAT AGATTACAGC
ACAAGACACG GAATAGATGT GAAAGTCACA CCATGCGGTT ATTTCGCTGA ACACGGCTAC
CACGCGGTGG AAAGGTACCT GAAAAAACAC GGCAGGGATT TCACTGCGAT CTTTGCAATA
AACGATCTTT CGGCCTTCGG TGCGCTCAAA GCACTTCACG ATCTTGGTGT ATCTGTTCCA
GATGAAGTTT CTGTCATGGG ATTCGACGAC GATCCCATAT CGAGCTATAC CATTCCTCCA
CTCACCACGG TGAGACAACC GAGGGAAGAG ATGGGAAGAG TGGCCTTTGA GATTCTTTAC
GAGAGACTTT CCGGGAAGAA AGGGGTTGCG AGAAGAGTCG TTCTACCTGT TGAGATCATC
GAAAGAGAAT CCGTGAAACA ACTATAA
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| Protein sequence | MPSIKDVARL AGVSIATVSR VINGYDNVSE ETRKRVIDAI RKLNYHPVYA VKGAVLKRTI
GVLVPNFGGF HYNEILTGIE KEAIKRDFTL MISTTLHRTS VELERLEVFF AKRVDGIIVC
SSKKDEEQLE RLIKSAIPVV VVDREEPEIR LDNVGIDNYA AGRMCAKYLL EKGHRKVLLL
KGRKDIYSFS DRERGFIDYS TRHGIDVKVT PCGYFAEHGY HAVERYLKKH GRDFTAIFAI
NDLSAFGALK ALHDLGVSVP DEVSVMGFDD DPISSYTIPP LTTVRQPREE MGRVAFEILY
ERLSGKKGVA RRVVLPVEII ERESVKQL
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