Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1500 |
Symbol | |
ID | 5169997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 1488685 |
End bp | 1489206 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640564026 |
Product | hypothetical protein |
Protein accession | YP_001245084 |
Protein GI | 148270624 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000125057 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGGAGAA GAGCGGGTTT CACGTTGATT GAGCTTCTGA TCGTCATGGC TATCATCGCG GCTCTGATGG CGGTGCTCAT TCCATCAGTA ACAGGGGCAA TGAGAAAAGC AACTGCCACA AAGATAGCGG TGCAACTGAG AAACATAGAG CAAGCGGTGG AACAATATCT GTATTCTATG TTGCCAAAGT CTGATGATTT AGACCAGTCA CCATATAATG ATCTTGATAG AAATCAGGAT TTCAGAGATT TTACAAATGT TGGGCTTCTA AACAACGACG AAGTTGATAT TAAACTAATA CCTGATGATA ATAATAAAAG GATAAAAATT GCCCTCTATT ACAATGCTCC TAGTACCGTC ATAGCACAGC TGATAGTAGG TACTCTCAGA GAAGCGTACG GTGGTGGAAC GACGAAAAAT CTTGGCTCGC TAGATGATGT TGATGAAAAT ACTGACGATG GAGCTTACTA CAATAACACC AATGTTTTTA TCATCAAATC CATCGACGCC TTCTGGTGGT AA
|
Protein sequence | MRRRAGFTLI ELLIVMAIIA ALMAVLIPSV TGAMRKATAT KIAVQLRNIE QAVEQYLYSM LPKSDDLDQS PYNDLDRNQD FRDFTNVGLL NNDEVDIKLI PDDNNKRIKI ALYYNAPSTV IAQLIVGTLR EAYGGGTTKN LGSLDDVDEN TDDGAYYNNT NVFIIKSIDA FWW
|
| |