| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1484 |
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| Symbol | |
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| ID | 5171188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1469308 |
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| End bp | 1469973 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640564010 |
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| Product | ribonuclease H |
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| Protein accession | YP_001245068 |
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| Protein GI | 148270608 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3341] Predicted double-stranded RNA/RNA-DNA hybrid binding protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000443868 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGTTGG CAAAAAAATA CTACGCTGTG AGGAAAGGAA GGGTACCAGG AATCTATGAG
TCCTGGGAAG AGGCAGAAAA ACAGGTAAAG GGCTTTCCGG GAGCAGAGTA CAAAAGTTTT
GAGAAGATAG AGGATGCAAA GGCATATCTT GAGGGAAAAG ATGAATGCAC CTGCCCGGAA
CTTGACGAAG AGACGATGAT CGCCTATGTG GATGGGAGTT ATGATGTGGT CTGTGGTTCT
GGAGTGGTTC TGTGCTATAG GGGAAAGAAA GAGGAGTACT ATTTCTGGAC GGACATCGAT
GAGTTCAAAG ACTCAAGGAA CATAGCCGGA GAGATCATGG CTGCACTTTT TGCCATGGAC
TGTGCTTTGA AGAAAGGAGC AAAAAGACTC ATTCTCAGGC ACGATCTTGA AGGGCTTGAA
AAGTGGGCAA CGGAAGAGTA CAGAACAAAA GAGCCGGTGA CGCGTGTTTA CAAGTACCTT
TACGAGCAGT TTTGCAGGAG CGGTCTTGAA GTGGTCTTTG AGAAGGTGAA GAGTCACTCT
GGAGACTTTT GCAACGATGA GGCTGACAGG CTGGCAAAAG AAGCAGCGAA AAAAAGATCA
AACGTTGAGT GGACTTTGAG GGATTTCGAG AGTACAATGA AGATACTGGA TCAAAAGAGG
AGATGA
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| Protein sequence | MKLAKKYYAV RKGRVPGIYE SWEEAEKQVK GFPGAEYKSF EKIEDAKAYL EGKDECTCPE
LDEETMIAYV DGSYDVVCGS GVVLCYRGKK EEYYFWTDID EFKDSRNIAG EIMAALFAMD
CALKKGAKRL ILRHDLEGLE KWATEEYRTK EPVTRVYKYL YEQFCRSGLE VVFEKVKSHS
GDFCNDEADR LAKEAAKKRS NVEWTLRDFE STMKILDQKR R
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