Gene Tpet_1417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1417 
Symbol 
ID5170838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp1407040 
End bp1407324 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content47% 
IMG OID640563946 
Productflagellar hook-basal body complex subunit FliE 
Protein accessionYP_001245006 
Protein GI148270546 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGACA GGATAGAGGG GCTCGGCCCT TTGAGCCAGA GTGGAAAGAC TCAAAAGAAA 
AATGAAAACA ACTTTTCAGA AGCGCTGAAA GAAGCCCTGG AAAAGGTAAA CGACATACAG
AAGAAAGCCG AGAAGGCAGC GGATGATTTC GCCCAGGGCA GGATAAGCAA CATACACGAG
GTTATAATAG AAGCCGAGAA GGCTTCCATA GCGTTGAGGC TCACCGTCGA AGTAAGAAAC
AGAATCGTGG AAGCTTACAG AGACATCATG AGGATGCAAA TCTGA
 
Protein sequence
MVDRIEGLGP LSQSGKTQKK NENNFSEALK EALEKVNDIQ KKAEKAADDF AQGRISNIHE 
VIIEAEKASI ALRLTVEVRN RIVEAYRDIM RMQI