| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1392 |
|---|
| Symbol | |
|---|
| ID | 5171171 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | - |
|---|
| Start bp | 1384674 |
|---|
| End bp | 1387049 |
|---|
| Gene Length | 2376 bp |
|---|
| Protein Length | 791 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640563918 |
|---|
| Product | ATPase |
|---|
| Protein accession | YP_001244982 |
|---|
| Protein GI | 148270522 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAATC TGGAAGAGTA CACGGAAAAG GCGCAGAAAG TGATGATGAG CATTCAGGAT
ATAATGACCC GATACAGACA AAATCAGCTT TCCAGTGAGC ACATACTGCT TGCGATATTG
GAAGAAGGAA ACAACGTTGG TGTGGAGCTT CTGAAGGAGC TGAACGTGGA CATAAACAGG
CTCAAAGATG AGGTGGAGGT GTTCATTGGG AAATACGGAG TTAGAGTTCC TGAAGGAGCA
TCTGTTTCTC AGATTTTCAT AACTCCGGAC GCGAGGCACG TCATTGAAAA AGCGCGAGAA
GAAGCGAGAA GAATGGGAGA TTCAAAAATA GGAACCGAGC ACCTTATTTT GGGAATGGTC
CTGTCACCCG ATTCCACGGC GTTCCGAATT CTCTCGAGAT ATGGTGTGAC ACCTGAGAGA
GTCTATGAAG CAATAAGGAA GATCAGATCA ACGGGTAAAA CAGATGAGGC AGAGAACGTG
GAAGCGCTCG CTCGCTTCAC AATGGATCTC ACACAGCTAG CCCGCGAAAA AAAGCTCATG
CCTGTAGTAG ATCGTGAAAA GGAAATCAGA AGGGTGATAC AGATACTGTC CAGAAGAACA
AAGAACAACC CGGTCCTCAT AGGAGACCCG GGAGTGGGAA AGACAGCTGT CGTCGAGGGG
CTCGCCCAGA GAATAGTTGA AGGGAAAGTT CCTCTGTTTT TGAGAAACGT CAGAGTCTTA
AAACTCGACA TGGGCAGACT GGTGGCAGGG ACCCGTTTCA GAGGAGATTT TGAAGAAAGA
CTGAAACGCC TCCTCGATGA ATTGAAGAGA AAAAAAGGAG AAGTAATACT CTTCATCGAC
GAGGTTCACA CGGTGGTAGG AGCGGGAGCA GCCGAAGGTG CTCTCGATGC CGCGAACATA
ATGAAACCAG AACTCACAAC GGGAGAGATT CAGATAATAG GAGCAACCAC CGTTGAGGAG
TACAGAAAAT ACATAGAAAA AGACAGGGCG CTTGAGAGAA GATTCCAGCC GGTCATAGTG
GAAGAGCCGA CGGTCGAGCA GACGATTGAA ATATTGAAAG GGTTAAGAAA GGTCTTTGAA
GAACATCATC ACGTGAAGAT AACGGATGAC GCTCTGGAGA CTGCGGCGAA ACTCTCCGCG
CGATACATAA CAAACAGATT CCTCCCGGAC AAGGCCGTTG ATCTGATAGA CGAAGCGGCC
GCTTATGTTC GCCTTGAATC CTCGTACCCT TCAGAAGAAC TCCTGAAACT CGAAGAAGAG
ATCAAAAACC TTGAGGAAAA AATAAACGAC GCCGTTGTGA AGGGAGAATA CGAAGAAGCG
GCAAAGCTGA AGGTCGAACT CCAGAGATTG AAAAACGAAT ACGAAGAAAA AAGGAAAAAA
CAAGAAAAGG TGGAACCGGT TGTCGATGAG AACGTTGTGG CAAGGATCGT GGAACAGTGG
ACCGGCATTC CCGTGTCTCG AATCATGGAA TCCGAAAGAG AGAAACTCCT GAAACTCGAA
GAATTCATAC ACCAGCGCCT GGTGAATCAG GAGGAAGCCG TGAAGATAGT GGCGCGGACC
ATAAGACGCG CAAGGGTTGG TATCAAAAAT CCGAGAAGGC CCATCGGTGT CTTTCTGTTC
CTCGGACCAA CGGGCGTGGG AAAGACAGAA CTCGCCAGAA CTCTCGCAGA TGTGCTCTTC
GGCAGTGAAG ACGCCATGAT CAGGCTCGAC ATGAGTGAGT ACATGGAGAA ACACTCCGTT
GCCAGACTCA TAGGGGCACC TCCGGGTTAC GTGGGTTACG AAGAGGGAGG ACAGCTCACC
GAGGCTGTGA GAAAAAGGCC CTACAGTGTG ATTCTCCTCG ATGAGATAGA AAAGGCACAT
CCAGACGTAT TCAACATCCT GCTTCAGGTG TTCGAAGACG GGCGATTGAC CGATGGAAAA
GGAAACACTG TGGACTTCAG AAACACCATC ATCATCATGA CGAGCAACAT AGGAAGCGAG
AAGATCCTCG AAATGTCGGA AAACGGTGTG AGAATTGAGA TAGAAAGAGA ACTTCGAAAC
ACCTTCAAAC CCGAGTTCCT GAACAGAATA GACGCCATAG TTTACTTCAA ACCGCTCACG
ATGGAAGAGG TGAAGAAGAT AGTGGAAATC ATGGTGAGAC AGCTCCAGGA AATACTGAAA
GAGAAGAACA TCTCCATCGA GCTCACAGAA AGGGCGAAAG ATTACCTGGC AGAGGCGGGT
TACGTGCCGT CTCTCGGCGC AAGACCACTC CGAAGAATCA TAGAACTCGA ACTCGAGTCG
ATGATAGCGG ATAAAATACT GGAGGGAGAG ATAAAAGAGG GAGACAGGGT TCTGGTCGAC
GCGGACGAAT ACGGTCTGAA GATAGAGAGG AGGTGA
|
|---|
| Protein sequence | MFNLEEYTEK AQKVMMSIQD IMTRYRQNQL SSEHILLAIL EEGNNVGVEL LKELNVDINR
LKDEVEVFIG KYGVRVPEGA SVSQIFITPD ARHVIEKARE EARRMGDSKI GTEHLILGMV
LSPDSTAFRI LSRYGVTPER VYEAIRKIRS TGKTDEAENV EALARFTMDL TQLAREKKLM
PVVDREKEIR RVIQILSRRT KNNPVLIGDP GVGKTAVVEG LAQRIVEGKV PLFLRNVRVL
KLDMGRLVAG TRFRGDFEER LKRLLDELKR KKGEVILFID EVHTVVGAGA AEGALDAANI
MKPELTTGEI QIIGATTVEE YRKYIEKDRA LERRFQPVIV EEPTVEQTIE ILKGLRKVFE
EHHHVKITDD ALETAAKLSA RYITNRFLPD KAVDLIDEAA AYVRLESSYP SEELLKLEEE
IKNLEEKIND AVVKGEYEEA AKLKVELQRL KNEYEEKRKK QEKVEPVVDE NVVARIVEQW
TGIPVSRIME SEREKLLKLE EFIHQRLVNQ EEAVKIVART IRRARVGIKN PRRPIGVFLF
LGPTGVGKTE LARTLADVLF GSEDAMIRLD MSEYMEKHSV ARLIGAPPGY VGYEEGGQLT
EAVRKRPYSV ILLDEIEKAH PDVFNILLQV FEDGRLTDGK GNTVDFRNTI IIMTSNIGSE
KILEMSENGV RIEIERELRN TFKPEFLNRI DAIVYFKPLT MEEVKKIVEI MVRQLQEILK
EKNISIELTE RAKDYLAEAG YVPSLGARPL RRIIELELES MIADKILEGE IKEGDRVLVD
ADEYGLKIER R
|
|---|
| |