| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1382 |
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| Symbol | |
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| ID | 5171134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1374887 |
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| End bp | 1375813 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640563908 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_001244972 |
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| Protein GI | 148270512 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000550702 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGATGG CGAGATACAG AGTGCACGTG AACGATCCTC TCGATAAAGA GGCAACGCAG
CTTCTTATGA GCAAAGATGA ACTCGAAGTC ACATCGGAAC ACCTGGAAAA AGACGAATTG
ATGAAGATCA TACCAGAGAT TGATGTTCTT GTCGTCAGAA GCGCCACTAA GGTCACGGCT
GATATCATAG AAGCCGGAAA GAACTTGAAG ATCATAGCAA GGGCAGGTAT TGGGCTGGAT
AACATAGACG TTCAAAAGGC CAAGGAGAAA GGAATAAAAA TTCTCAACAC TCCAGGTGCC
AGCGCTCCAT CCGTGGCAGA ACTCGCGATG GGTTTGATGC TCGCCTGCGC TCGTCACATA
GCAAGAGCCA CCATATCCCT CAAAGAAGGA AAATGGGAAA AGAAAGCACT CAATGGAAAG
GAACTTCTTG GAAAAACACT GGGACTCATT GGATTTGGAA ACATCGGACA GGAAGTGGCA
AAAAGAGCCC TTGCCTTTGG AATGAAAATC ATCGCTTACG ATCCCGCAAA ACCCGCAACG
GATCTTCCCG TTGAATATGT GGATCTGGAT ACTCTTTTCA GAGAAAGCGA CTTCATTTCT
CTGCATGTGC CTCTCACGGA ATCAACCAGG CACATCATAA ACAGAGAGAG CATCGCAAAG
ATGAAAGACG GTGTCATCAT AGTAAACACA GCCCGCGGAG GGACGATCGA CGAAGAAGCC
CTGTACGAAG CCCTTGTGAG TGGAAAAGTT TACGCCGCGG GGCTCGACGT TTTCGAGGTG
GAACCACCCA CTGATGAGAT CAGAAGAAAA CTTTTGAACC TGGACAACGT TGTTGCAACT
CCCCATATAG GTGCCTCTAC AGACGAAGCC CAGAATAGAG TTGGAACAGA ACTCGTGGAG
AAGATTTTCA AGGAACTGGG AATCTGA
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| Protein sequence | MKMARYRVHV NDPLDKEATQ LLMSKDELEV TSEHLEKDEL MKIIPEIDVL VVRSATKVTA
DIIEAGKNLK IIARAGIGLD NIDVQKAKEK GIKILNTPGA SAPSVAELAM GLMLACARHI
ARATISLKEG KWEKKALNGK ELLGKTLGLI GFGNIGQEVA KRALAFGMKI IAYDPAKPAT
DLPVEYVDLD TLFRESDFIS LHVPLTESTR HIINRESIAK MKDGVIIVNT ARGGTIDEEA
LYEALVSGKV YAAGLDVFEV EPPTDEIRRK LLNLDNVVAT PHIGASTDEA QNRVGTELVE
KIFKELGI
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