Gene Tpet_1366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1366 
Symbol 
ID5170194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand- 
Start bp1357166 
End bp1357780 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content47% 
IMG OID640563891 
Productredox-sensing transcriptional repressor Rex 
Protein accessionYP_001244956 
Protein GI148270496 
COG category[R] General function prediction only 
COG ID[COG2344] AT-rich DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAGA TGATACATCT TCCAAGATCT ACCTTTGAAA GGTTGAAGAT GTACCGAAAA 
GTTCTGGAAG CGACAAAAAA ACCTTACATC TCCTCTGATG AGATCGCAAG ATTCCTCGAA 
ATAAACCCGG ACCTCGTGAG GAAAGACTTT TCCTATCTCA AATGTCAGGG AAAGCCCAGG 
GTCGGCTACG ATGTGGAAGA ACTCAGAAAA GAACTCGACG ATCTCTTCGG AGTGAACAAC 
ACCACTAACA TGATCATCGT TGGAGCAAAT GACCTCGCAA GGGCTTTGTT GAGCCTGGAC 
TTTTCGAAAG CCGGTGTGAA AGTCGTAGCC GTGTTCGATA CAGAGAAGGA AAACGTGGGA 
AAGTTCATAG GAGAATTCGC TGTCAGAGAA CTGGACGTTC TGGAAAGAGT CATCAGAAGG 
TTCGATGCGG AGATAGCCGC ACTGTGCGTG TCAAAGGACA GAGCGCAGGC TACAGCCAGA 
TTTCTCATCG AAAAGGGAAT AAAAGCCGTA TGGAACTTCA CGGGAGTTCA TCTCGACCTT 
CCAGAAGGTG CCATAGTCGT GGACGAAGAC CTAACTCAGT CTCTTCTCAC AATAAAACAT 
CTTCTGAAGA AGTGA
 
Protein sequence
MAEMIHLPRS TFERLKMYRK VLEATKKPYI SSDEIARFLE INPDLVRKDF SYLKCQGKPR 
VGYDVEELRK ELDDLFGVNN TTNMIIVGAN DLARALLSLD FSKAGVKVVA VFDTEKENVG 
KFIGEFAVRE LDVLERVIRR FDAEIAALCV SKDRAQATAR FLIEKGIKAV WNFTGVHLDL 
PEGAIVVDED LTQSLLTIKH LLKK