Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1342 |
Symbol | |
ID | 5170123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 1330548 |
End bp | 1332245 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640563867 |
Product | DNA primase |
Protein accession | YP_001244932 |
Protein GI | 148270472 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000143 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATTCCTC GAGAGGTCAT CGAGGAAATA AAAGAAAAAG TTGACATCGT AGAAGTCATT TCAGAGTATG TGAATCTCAC CCGGGTAGGT TCTTCCTACA GGGCTCTCTG TCCCTTTCAT TCAGAAACCA ATCCTTCTTT TTACGTTCAT CCGGGTTTGA AGATATACCA TTGTTTCGGC TGTGGTGCGA GCGGGGATGT CATCAAATTT CTTCAGGAAA TGGAAGGGAT CAGTTTCCAG GAAGCGCTGG AAAGACTTGC CAAGAGAGCT GGGATTGATC TTTCTCTCTA CAGAACAGAA GGGACTTCTG AATACGGAAA ATACATTCGT TTGTACGAAG AAACGTGGAA AAGGTACGTC AAAGAGCTGG AGAAATCGAA AGAGGCAAAA GACTATTTAA AAAGCAGAGG CTTTTCTGAA GAAGATATAG CAAAGTTTGG CTTTGGGTAC GTTCCTAAGA GATCCAGCAT CTCTATAGAA GTTGCAGAAG GCATGAACAT AACACCGGAA GAACTTGTCA GATACGGTAT CGCGTTAAAA AAGGGTGATC GATTCGTTGA TAGATTCGAA GAAAGAATCG TTGTTCCAAT AAAGAACGAC AGTGGACATA TTGTGGCTTT TGGTGGGCGT GCTCTCGGCA ACGAAGAACC AAAGTATTTG AACTCTCCAG AGACCAGGTA TTTTTCGAAG AAGAAAATCC TTTTTCTCTT CGATGAGGCG AAAAAAGTGG CAAAAGAGGT CGGTTTTTTC GTCATCACTG AAGGCTACTT CGACGCGCTC GCATTCAGAA GAGATGGAAT ACCAACGGCG GTCGCTGTTC TTGGGGCGAG TCTTTCAAGG GAAGCAATTC TGAAGCTTTC GGCGTATTCG AAAAATGTCA TACTGTGTTT CGATAATGAC AGAGCAGGCT TCAGAGCCAC TCTCAAATCC CTCGAAGACC TCCTTGAATA CGAATTCAAC GTGCTTGTAG CAACCCCCTC TCCTTACAAA GATCCGGATG AACTCTTTCA GAAGGAAGGG GAAGGTTCGC TGAAAAAGAT GCTGAAAAAC TCACGTTCGT TCGAATATTT CCTGGTGACT GCTGGTGAAG TCTTCTTTGA CAAAAACAGC CCCGCGGGTG TGAGATCCTA CCTTTCTTTC CTCAAAGGTT GGGTCCAGAG GATGAGAAAG AAAGGATATT TGAAACATGT AGAAAATCTC GTGAAGGAAG CTTCGGCTTC TCTCCAGATA CCAGAAAACC AGATTTTGAA CTTTTTTGAG AGTGAAAAGT CTAACACTAT GCTTGTTCAT GGATCCAGGT CGTCAAAGGT TTACGATGAG GGAAGAGGAC TTGCTTACCT GTTTTTGAAC TACGAAGATT TGAGGGGAAA GATTCTGGAG CTGGACTTAG AGGTACTGGA AGATGAAAAC GCGAGAGAAT TTTTCAAGAG GGTTTCATCC GATGAAGATT TAAGCGAAGC TATAGAAAAC TTTCCAAAAG AGTTGAAAGA TTGGGTTTTT GAAACGATAG AAAGCATTCC TCCTCCAAAG GATCCCGAGA AATTTCTCGC TGACCTCTCC GAAAAGTTGA AAATCCGGCG GATAGAGAGA CGTATTGCAG AAATAGATGA GATGATAAAA AAGGTTTCAA ACGATGAGGA AAGGCGTCTT CTTCTCTCTA TGAAGTTGGA TCTCCTCAGA AAAATAAAGA GGAGGTGA
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Protein sequence | MIPREVIEEI KEKVDIVEVI SEYVNLTRVG SSYRALCPFH SETNPSFYVH PGLKIYHCFG CGASGDVIKF LQEMEGISFQ EALERLAKRA GIDLSLYRTE GTSEYGKYIR LYEETWKRYV KELEKSKEAK DYLKSRGFSE EDIAKFGFGY VPKRSSISIE VAEGMNITPE ELVRYGIALK KGDRFVDRFE ERIVVPIKND SGHIVAFGGR ALGNEEPKYL NSPETRYFSK KKILFLFDEA KKVAKEVGFF VITEGYFDAL AFRRDGIPTA VAVLGASLSR EAILKLSAYS KNVILCFDND RAGFRATLKS LEDLLEYEFN VLVATPSPYK DPDELFQKEG EGSLKKMLKN SRSFEYFLVT AGEVFFDKNS PAGVRSYLSF LKGWVQRMRK KGYLKHVENL VKEASASLQI PENQILNFFE SEKSNTMLVH GSRSSKVYDE GRGLAYLFLN YEDLRGKILE LDLEVLEDEN AREFFKRVSS DEDLSEAIEN FPKELKDWVF ETIESIPPPK DPEKFLADLS EKLKIRRIER RIAEIDEMIK KVSNDEERRL LLSMKLDLLR KIKRR
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