Gene Tpet_1327 details

Gene Information

• Locus tag: Tpet_1327
• Symbol: engB
• ID: 5170811
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga petrophila RKU-1
• Kingdom: Bacteria
• Replicon accession: NC_009486
• Strand: -
• Start bp: 1322584
• End bp: 1323171
• Gene Length: 588 bp
• Protein Length: 195 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 640563852
• Product: ribosome biogenesis GTP-binding protein YsxC
• Protein accession: YP_001244917
• Protein GI: 148270457
• COG category: [R] General function prediction only
• COG ID: [COG0218] Predicted GTPase
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.00220989
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTATTC AGGATGTAGA ACTGGTTAAA GTAGCCAGAA CTCCAGGTGA TTATCCTCCT 
CCTTTGAAGG GAGAAGTTGC CTTCGTTGGA AGATCGAACG TGGGTAAATC TTCCCTTCTC 
AATGCCTTGT TCAACAAAAA GATCGCTTTT GTGAGCAAAA CTCCCGGAAA AACGAGATCG 
ATAAATTTCT ATCTTGTCAA CTCAAAATAC TACTTCGTGG ATCTTCCGGG GTATGGGTAC 
GCGAAAGTTT CCAAGAAAGA ACGAATGCTC TGGAAGCGAC TCGTGGAGGA CTACTTCAAA 
AACAGATGGT CACTTCAGAT GGTCTTTCTC CTTGTGGATG GAAGGATCCC ACCTCAGGAC 
AGCGACTTCA TGATGATAGA GTGGATGAAA AGCCTGAACA TTCCGTTCAC CATCGTTCTC 
ACCAAGATGG ATAAAGTGAA GATGTCAGAG AGGGCAAAAA AGCTTGAAGA ACACCAGAAG 
GAGTTCTCAA GGTACGGAGA GTACACGATT ATACCAACTT CCTCAGTTAC CGGAGAAGGA 
ATAAGTGAAC TTCTGGATTT GATATCAACA CTACTGAAAG AAAATTGA 

 

Protein sequence

MIIQDVELVK VARTPGDYPP PLKGEVAFVG RSNVGKSSLL NALFNKKIAF VSKTPGKTRS 
INFYLVNSKY YFVDLPGYGY AKVSKKERML WKRLVEDYFK NRWSLQMVFL LVDGRIPPQD 
SDFMMIEWMK SLNIPFTIVL TKMDKVKMSE RAKKLEEHQK EFSRYGEYTI IPTSSVTGEG 
ISELLDLIST LLKEN