Gene Tpet_1318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1318 
Symbol 
ID5170115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp1314966 
End bp1315358 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content49% 
IMG OID640563843 
Product30S ribosomal protein S11 
Protein accessionYP_001244908 
Protein GI148270448 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0100] Ribosomal protein S11 
TIGRFAM ID[TIGR03632] 30S ribosomal protein S11 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.13052e-11 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGAA AGAGAGGCAG CTCTTCAAGG AAACAGAAGA AAGTTGGCTT CGATTACGGA 
GTGGTGCATA TAAAATCCAC TTTCAACAAC ACCATAATTA CTCTCACTGA CAAAGATGGA
AATACACTCA CCTGGGCCAG CGGAGGAACG GTGGGATTCG AGGGAACAAG GAAGGGAACA
CCCTACGCTG CTCAGCTGGC AGCCGATAAA GTGGCAAGAG AAGCTCTCAG AATGGGCATC
AAAAAAGTCG ATATTCTTGT GAAGGGACCT GGCCCGGGAA GAGAACCTGC GATAAGAACG
CTTCAGGGCG CCGGTCTTGA AATCAACCAG ATAAAGGATG TTACTCCTAT TCCGTTCAAC
GGCTGCAGAC CCAAGAAGAG AAGAAGAGTG TGA
 
Protein sequence
MARKRGSSSR KQKKVGFDYG VVHIKSTFNN TIITLTDKDG NTLTWASGGT VGFEGTRKGT 
PYAAQLAADK VAREALRMGI KKVDILVKGP GPGREPAIRT LQGAGLEINQ IKDVTPIPFN
GCRPKKRRRV