| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1308 |
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| Symbol | rplR |
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| ID | 5171545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1309934 |
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| End bp | 1310302 |
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| Gene Length | 369 bp |
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| Protein Length | 122 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640563833 |
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| Product | 50S ribosomal protein L18 |
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| Protein accession | YP_001244898 |
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| Protein GI | 148270438 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0256] Ribosomal protein L18 |
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| TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000199642 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAAAGA AGGAGTCAAA AAAAGAGCAG CGACTCAGAA GGCACAGAAG AGTTAGGAAA
AAGGTGTTTG GAACTCCCGA AAGACCAAGG CTCTGTGTTT TCAGAAGCAA TAAACACATA
TACGCACAGA TCATAGATGA CACTATAGGC CACACTCTTG TTTCCGCTTC TACTCTCGAC
CCCGAGCTGA GGGAAAAGCT TCAGAAAACG TGGAACGTAG AGGCAGCCAA AGAAGTAGGG
CTTCTCATAG GAAAAAGGGC TCTCGAAAAG GGAATAAAGA AGGTCGTGTT CGATAGAGGC
GGATACAAGT ACCACGGTAG GGTTAAGGCA CTGGCGGATG GTGCCAGAGA AGCTGGACTC
GAATTCTGA
|
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| Protein sequence | MIKKESKKEQ RLRRHRRVRK KVFGTPERPR LCVFRSNKHI YAQIIDDTIG HTLVSASTLD
PELREKLQKT WNVEAAKEVG LLIGKRALEK GIKKVVFDRG GYKYHGRVKA LADGAREAGL
EF
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