Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1307 |
Symbol | rplF |
ID | 5170009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 1309365 |
End bp | 1309919 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640563832 |
Product | 50S ribosomal protein L6 |
Protein accession | YP_001244897 |
Protein GI | 148270437 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000236844 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCGAC TCGCGAAAAA GCCCATAGTC TTACCACAGG GTGTTACGGT TGAAATAAAA GACAACGTTG TTAAGGTGAA GGGACCCAAG GGAGAACTCA GTCAGGAATT TCTCCCTTAC GTGAAAATAG AAGTTGAAGG TAATGAAGTC TGGGTAAGAC CCAACGAGAA TCAGATTATA AGAAAATCTG ACTGGAGAAA GATAAAGATG TTCCAGGGAA CTTACTGGTC CCTCATCAGA AATATGGTTG TTGGTGTAAC AGAAGGCTAC AAGAAAGAGC TGGAAATCGT AGGAATCGGT TACAGGGCTC AGCTTCAGGG GAATACAGTA GTGATGAACC TTGGTTACGC TCATCCCGTT GTTTACGAGA TACCCTCTGA TGTGAAAATT GAAGTTCCTG CACCGAACAG GATAGTTGTT TCTGGCATCG ATAAACAGAG GGTTGGACAG GTTGCCGCTG AGATCAGAGC GTTCAGACCA CCAAATGTCT ACACCGGAAA GGGAATCAGG TATGTTGGTG AAGTGGTGAG ACAGAAAGAA GGTAAGAAAG CATAA
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Protein sequence | MSRLAKKPIV LPQGVTVEIK DNVVKVKGPK GELSQEFLPY VKIEVEGNEV WVRPNENQII RKSDWRKIKM FQGTYWSLIR NMVVGVTEGY KKELEIVGIG YRAQLQGNTV VMNLGYAHPV VYEIPSDVKI EVPAPNRIVV SGIDKQRVGQ VAAEIRAFRP PNVYTGKGIR YVGEVVRQKE GKKA
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