Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1306 |
Symbol | rpsH |
ID | 5171497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 1308947 |
End bp | 1309351 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640563831 |
Product | 30S ribosomal protein S8 |
Protein accession | YP_001244896 |
Protein GI | 148270436 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0096] Ribosomal protein S8 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000833036 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTGGAGCG ATCCAATTGC CGACATGCTA ACAAGAATCA GAAATGCCAA TATGGTTTTC AAAGAATATA CGGATATACC TGCTTCTAAC CTCAAGAAGA AGATCTGCGA GATCCTGAAA AGAGAAGGAT TCATAGCGGA CTACAAATAC ATCGAGGATG GAAAGCAGGG AATACTGAGG GTTTACCTCA AATACAAAGG CGGAAGGAAG AACAGAGAAA GAGTCATTCA CGGTATCGTC AGAGTGTCTC ACTCAGGTAG GAGAATTTAC GTTGACAAGG ATCATATTCC AAAAGTGAAA AACGGTCTTG GAATAGCCAT ACTCACTACT TCGAAGGGCG TTCTAACAGA TAAAGAAGCT CGTCAGCTTG GAGTCGGCGG AGAAGTAATC GCTTACGTCT GGTGA
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Protein sequence | MWSDPIADML TRIRNANMVF KEYTDIPASN LKKKICEILK REGFIADYKY IEDGKQGILR VYLKYKGGRK NRERVIHGIV RVSHSGRRIY VDKDHIPKVK NGLGIAILTT SKGVLTDKEA RQLGVGGEVI AYVW
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