Gene Tpet_1299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1299 
SymbolrplP 
ID5170958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp1306515 
End bp1306943 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content48% 
IMG OID640563824 
Product50S ribosomal protein L16 
Protein accessionYP_001244889 
Protein GI148270429 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0197] Ribosomal protein L16/L10E 
TIGRFAM ID[TIGR01164] ribosomal protein L16, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.08479e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGATGC CAAGAAGGGT CAAATACAGA AAACAACAAA GAGGAAGAAT GAAAGGAAAA 
GCCAAGGGAG GAACATTTGT TCAGTTCGGT GAATGGGGTC TCAAAGCACT CGAACCAGCT
TGGATCACAG CCCAGCAGAT AGAAGCTTGC CGAATTGCCA TGCTGAGGGC TATGAAAAGA
TCCGGAAAGA TCTGGATAAG AATATTCCCT GACAAACCTT ACACGAAAAA ACCACCTGAA
TCCAGGATGG GAAAAGGTAA GGGTAACGTT GAAGGATGGG TCGCCGTTGT GAAACCCGGG
AAGATTCTCT TTGAAGTGGC GGGAGTCGAT GAGGAAACAG CCCATGAAGC TCTCAGGTAC
GCTGCGAGTA AACTTCCCAT AGCTACTAAG GTAGTTCCCC GTCACCATAT TGGGGGTGAG
GCAGTATGA
 
Protein sequence
MLMPRRVKYR KQQRGRMKGK AKGGTFVQFG EWGLKALEPA WITAQQIEAC RIAMLRAMKR 
SGKIWIRIFP DKPYTKKPPE SRMGKGKGNV EGWVAVVKPG KILFEVAGVD EETAHEALRY
AASKLPIATK VVPRHHIGGE AV